Gene Ping_2940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2940 
Symbol 
ID4623648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3625393 
End bp3625938 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content42% 
IMG OID639798058 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_944241 
Protein GI119946561 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.434032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTAATA AACTCGGCTT TTATCAAAAT GCCAGACAGA TATCCAGTCC CTTTTATAAT 
CAACGACCTG CAGGCAGCGA GATTAGCTTA TTGGTTATTC ATTGTATTAG TCTGCCCGAA
GGTTGTTATG GCGGCCCGGA AATTGAGTCT TTATTTACCG GATGTTTAGA TTGTTATGCT
CACCCTGATT TTAGCAGCCT TGAAGGGCTT GAAGTCTCTG CACATTGTGT GATTCGCCGT
AATGGTGAGA TTGAACAATA TGTGCCTTTT GAAAAAGGTG CCTGGCATGC CGGGGCATCC
TATTTTGCCG GAGTTGATCG ATGCAATGAT TATTCCATTG GTATTGAGCT TGAGGGCACA
GATAAAAGCG CCTATACAGA AAGACAATAT CGTTCACTTG CAACCTTGAC TCAAAAAATA
CAGCAACGTT ATCCTGCTAT CAGTAAACAA CGAATAGTCG CACATAGTGA GATAGCGCCG
GGCAGAAAAA CGGATCCCGG CAGTGGATTT GACTGGGTTT ATTATTTGAG TTTGTTAAGT
GATTGA
 
Protein sequence
MINKLGFYQN ARQISSPFYN QRPAGSEISL LVIHCISLPE GCYGGPEIES LFTGCLDCYA 
HPDFSSLEGL EVSAHCVIRR NGEIEQYVPF EKGAWHAGAS YFAGVDRCND YSIGIELEGT
DKSAYTERQY RSLATLTQKI QQRYPAISKQ RIVAHSEIAP GRKTDPGSGF DWVYYLSLLS
D