Gene Ping_2930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2930 
Symbol 
ID4623638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3615318 
End bp3615965 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content49% 
IMG OID639798048 
Product2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 
Protein accessionYP_944231 
Protein GI119946551 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.764305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.29532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTGGA CTCTTTCACC TGGAGAGGTC TTTGCTCACT CGCCTGTCGT ACCAGTTATG 
GTGATTAATA ATATTGAAGA TGCGCTGCCA ATGGCCAGGG CGCTAGCGGC AGGAGGAATT
AATATTTTTG AAGTGACCTT AAGAACAAAG GTTGCTTTAG AGGCGATTAA AGCTATTGCG
ACAGCGATGC CCGAGGCCAT GATCGGTGCC GGGACTATTA TCAATGCACA ACAATATGAC
GCTGCCGTTG CCGCCGGTGC AAAATTTATT ATCTCTCCCG GATACAGCCA GCGCTTATTA
GAGCATGCCA AAACGGGATA TGCACCTTTG ATTCCAGGCG TTGCAACGCC TTCGGAAATC
ATTACTGCCT TAGAGCTCGG TTATGATCAT CTGAAGTTTT TCCCGGCAGA GGCGAATGGT
GGCGCTGCTG CATTAAAAGC AATTGCAGGG CCCCTACCTC AGGTGCGTTT TTGCCCAACG
GGTGGAATAA GCCTGAACAA CGTGGCTGAT TACATGGCCT TAAATTGTGT GGCAACTGTC
GGTGGTTCCT GGATGCTCCC TAATGACGCT ATTGCACAGG GTCATTGGGA TAAAGTGACT
AAGCTTGCCG GGCAGGCAGT GTCTTTGATG GCAAACTTAA AGGCTTAA
 
Protein sequence
MNWTLSPGEV FAHSPVVPVM VINNIEDALP MARALAAGGI NIFEVTLRTK VALEAIKAIA 
TAMPEAMIGA GTIINAQQYD AAVAAGAKFI ISPGYSQRLL EHAKTGYAPL IPGVATPSEI
ITALELGYDH LKFFPAEANG GAAALKAIAG PLPQVRFCPT GGISLNNVAD YMALNCVATV
GGSWMLPNDA IAQGHWDKVT KLAGQAVSLM ANLKA