Gene Ping_2913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2913 
Symbol 
ID4624436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3595921 
End bp3597021 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content45% 
IMG OID639798033 
ProductABC transporter for sugar/spermidine/putrescine/iron/thiamine ATP-binding protein 
Protein accessionYP_944216 
Protein GI119946536 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.129164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAGTT CGACTGGTTT AACATTAAAA AACATTAAAA AATCCTACGG CAAAACCGAG 
GTATTACATG GTATTGACTT GGATATCAAA CTGGGTGAGT TTGTCGTCTT TGTTGGCCCC
TCCGGCTGTG GTAAATCAAC GCTGCTGCGC ATGATTGCAG GTCTTGAAGA TATTACCAGT
GGCGATTTGT TTATCGAGGG TCATAACGTC AATGATATCC CCTCGGCCAT GCGCGGTATT
GCCATGGTAT TTCAATCCTA TGCGTTATAC CCGCATATGA CCGTTTATGA CAACATGGCC
TTTTCCATGC GCATTGCTAA AGAGGACAAA GCCACGATCG ACGAGCGCGT AACGAGTACG
GCAGCGATGT TGCAATTAAC CGATTATTTA TATCGTTTAC CCAAAGCACT CTCAGGCGGA
CAACGACAAC GGGTCGCGAT TGGACGTGCT ATTGTACGAA ATCCCAAAGT ATTTCTCTTT
GATGAGCCTC TCTCCAATCT TGATGCTTCA CTGCGGGTAC AAACACGCAT TGAAATTGCC
AATTTAAATG AGAGCCTGAA AGAAACCACC ATGATCTATG TCACCCATGA TCAGATTGAA
GCGATGACCC TGGCGGATCG TATTGTCGTG CTGTCGGCGG GAAAAATTGA GCAAGTGGGT
ACACCGCTTG AGTTATATGG CCAACCGGCT AATCTGTTTG TCGCACAGTT TATTGGCTCC
CCTGCCATGA ATATTTTTAC TGTTACCCTG ATTAAATCGG GAGAAATCAC CAGCATTCAA
AGTCAAAACG GTCACCAGGT GGATATCCCT ATAAAGAGTC ACCCTGATAT TGAAAATCAA
GTACTTACCG TTGGCGTGCG TCCGGAGGAT TTCCGTTTGG CAGATGAGAC GAGTTGCATG
TTGTCGGGCA CTATCTCCTT TGTAGAATCA TTAGGCGAAG TGACCCTATT ACACCTTGAT
AGCGCTGAAT CGACAACGCC TGTCATAGTA AAAATTCCGG GTATTATTAA TAAACACAAA
GGAGAAACCA TCTACCTGAC AGTGGATGCC GATAAAACAC ATCTTTTTGA TGCCAACGGA
ATCTCGTTAC GTTACCTCTA A
 
Protein sequence
MTSSTGLTLK NIKKSYGKTE VLHGIDLDIK LGEFVVFVGP SGCGKSTLLR MIAGLEDITS 
GDLFIEGHNV NDIPSAMRGI AMVFQSYALY PHMTVYDNMA FSMRIAKEDK ATIDERVTST
AAMLQLTDYL YRLPKALSGG QRQRVAIGRA IVRNPKVFLF DEPLSNLDAS LRVQTRIEIA
NLNESLKETT MIYVTHDQIE AMTLADRIVV LSAGKIEQVG TPLELYGQPA NLFVAQFIGS
PAMNIFTVTL IKSGEITSIQ SQNGHQVDIP IKSHPDIENQ VLTVGVRPED FRLADETSCM
LSGTISFVES LGEVTLLHLD SAESTTPVIV KIPGIINKHK GETIYLTVDA DKTHLFDANG
ISLRYL