| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2892 |
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| Symbol | |
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| ID | 4626228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 3569777 |
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| End bp | 3571231 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639798012 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_944195 |
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| Protein GI | 119946515 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.68035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0692611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGATAAAAC AAGGTTTGCA TTTAAAGATG GGGCAGCAAC TTGCAATGAC CCCACAATTG
CAGCAAGCAA TCAAATTGCT ACAACTCTCT ACACTGGATT TACAGCAGGA AATTCAGAAT
ATTCTCGACT CAAACCCGCT ATTAGAACAA GAAGATAACA ACGGTACGCA GGAAGTCATC
GCAAAGCAGG ATAGCAGTCA GATTGATACT TCTGAAGCAA TAACCCAGCA AGAGTTCTCT
AATGATTTAC CCGCTGAAAA TAACTGGGAA GAATCTTATT CTGAATATTC AAGCAGCTCC
ACAACTTCTC CCTCATCCTC TTCAAGTTAT GAAGGCGAGG ACAGTATTTA CCAGGGAGAA
TCTTCAACCT CTTTACAAGA TCATTTAATT TGGCAAATGC AACTGACCCC ATTTTCCGAT
ACGGATCTTG TCATAGCCGC TGCCCTCATT GACTCGATAG ATGAGTCTGG CTATTTAACC
GCGAGTTGTG AATCAATTTT GGAAAGCTTA ATCACTGAAG CTGATGATAT TGAATTAGAT
GAAGTACTGG TTGTCCTAAA ACGCATTCAA CATTTTGATC CAATCGGTGT TGCTGCTCGT
TCAACTCAGG AGTGTTTACA AATCCAACTG CGACATCTAC CGGAACAAAC ACCATGGCGC
AGTGAAGCGT TAACAATACT TGCTCATCAC ATGGATTTAC TGGGTAACCG GGATTACCGT
ACTCTGGCAA GAAAAAGTAA ATTAAAAGAG TTTGAATTAG CAGAGGTATT GCATTTAATT
CAAACGCTTG AACCCAGACC TGGAAACCAA ATCGAAAATA GCCAACCCCA ATATATTGTG
CCCGATGTTT ATGTCAAAAA AATTGCAGGT CAATGGCGTG TATCGCTCCA CCCAGATTCA
GATGCTAAGC TTTCCATAAA TCAAACATAT GCAAATTTAT GTAAAGGTAA TATTAGTAAA
GCTGATTCTC AGTTTATTAA AGGTCATTTA CAAGAAGCAA GATGGTTTAT TAAAAGCCTG
GAAAGCCGTA ACGAAACCTT ATTAAAAGTC TCTCATTGTA TTGTGCGCCA ACAACAAGCA
TTCTTCGAAT ATGGGGAAGA ATCAATGAAA CCCATGGTGC TTAATGATGT TGCGTTAGAG
GTAGATATGC ATGAATCGAC CATTTCCCGG GTCACGACAC AAAAATTCAT GCATACCTCA
AGAGGTATTT TTGAATTGAA GTTTTTCTTT TCCAGCCATG TTGCGACAGA AAGTGGAGGA
GAATGCTCCT CAACGGCAAT TAAGGCATTA ATCAAAAAAT TAATCTCTGC AGAGGTCAGC
AGCAAACCTT TAAGTGATAA TAAAATAGCA CTGTTACTTG AACACCAGGG TATTAAAGTG
GCGCGCCGTA CTATCACAAA ATATCGGGAA TTATTGGGGA TTTCATCATC AAGCCAACGA
AAAATGCTGC TCTGA
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| Protein sequence | MIKQGLHLKM GQQLAMTPQL QQAIKLLQLS TLDLQQEIQN ILDSNPLLEQ EDNNGTQEVI
AKQDSSQIDT SEAITQQEFS NDLPAENNWE ESYSEYSSSS TTSPSSSSSY EGEDSIYQGE
SSTSLQDHLI WQMQLTPFSD TDLVIAAALI DSIDESGYLT ASCESILESL ITEADDIELD
EVLVVLKRIQ HFDPIGVAAR STQECLQIQL RHLPEQTPWR SEALTILAHH MDLLGNRDYR
TLARKSKLKE FELAEVLHLI QTLEPRPGNQ IENSQPQYIV PDVYVKKIAG QWRVSLHPDS
DAKLSINQTY ANLCKGNISK ADSQFIKGHL QEARWFIKSL ESRNETLLKV SHCIVRQQQA
FFEYGEESMK PMVLNDVALE VDMHESTISR VTTQKFMHTS RGIFELKFFF SSHVATESGG
ECSSTAIKAL IKKLISAEVS SKPLSDNKIA LLLEHQGIKV ARRTITKYRE LLGISSSSQR
KMLL
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