Gene Ping_2829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2829 
Symbol 
ID4626273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3477578 
End bp3478462 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content41% 
IMG OID639797951 
ProductMscS mechanosensitive ion channel 
Protein accessionYP_944134 
Protein GI119946454 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTAG ATGCGGTGCT TAAAATATTA AACTACCCAA CGATCTCGCT CGTTGGTCAG 
ACAATTACTG TGGGCCAATG GCTGGTTATA CCCTTGGTCT TGTGTATCGG ATACTTGTTA
ACTAAAAGCT TTATAAATAT TTTATCGAAG CGTATGCTTG CCCGGAATAT GGACCCCAAT
CAGATTCATC TCATTAGAAG AATTATCTAT GTTTTAGCCA TTTCCATTTT ATTAATCACT
GTCTTAGATT TGATCAATAT TCCTATTGCC GCTTTTGCCT TTCTCTCCGG TGCGATCGCA
ATCGGGTTTG GTTTTGGTGC GCAAAACATT ATTAATAATT TTATCAGCGG TTGGATTTTA
ATGTGGGAAC AACCAATTCG AATTGGAGAT TATTTAGAAG TTGATAATGC CAAAGGAGTC
GTGGAGGAAA TTAATACCCG TTCAACAAGA ATTAGACGAG TTGACGGCGT TCACCTGTTG
ATTCCTAACA GTAAATTATT AGAAAATACC GTGGTAAACA GAACACTTGT TGATCATATT
ATGCGTACCT CTGTGTCTGT CGGGGTTGCC TATGGCTCAC CCGCTAAACA GGTGGCAGCT
TTAATTCTGC GCGCGGCTAA AGAGCAATCT ATTATCTTGG AAAATCCGCC ACCCGTGGTT
ACTTTTGAAG ATTTTGCTGA CAACTCTCTG GTCTTTGAAG TCAACTTCTG GATAAATGCA
ACCGTCGATG GCAGTTTACG AGCGGTCAGA AGTAACGTCC GTTTTCGTCT TGATGAGCTC
TTTGCCGAGC ACAATATTGT GGTTGCATTC CCACAACGAG ATCTGCATAT AGACGGCAGT
TTAACGCTGC TTAAAAATCC ATTAAAAGTC GCTTATGAAC GATAA
 
Protein sequence
MQLDAVLKIL NYPTISLVGQ TITVGQWLVI PLVLCIGYLL TKSFINILSK RMLARNMDPN 
QIHLIRRIIY VLAISILLIT VLDLINIPIA AFAFLSGAIA IGFGFGAQNI INNFISGWIL
MWEQPIRIGD YLEVDNAKGV VEEINTRSTR IRRVDGVHLL IPNSKLLENT VVNRTLVDHI
MRTSVSVGVA YGSPAKQVAA LILRAAKEQS IILENPPPVV TFEDFADNSL VFEVNFWINA
TVDGSLRAVR SNVRFRLDEL FAEHNIVVAF PQRDLHIDGS LTLLKNPLKV AYER