Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2829 |
Symbol | |
ID | 4626273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3477578 |
End bp | 3478462 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639797951 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_944134 |
Protein GI | 119946454 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTAG ATGCGGTGCT TAAAATATTA AACTACCCAA CGATCTCGCT CGTTGGTCAG ACAATTACTG TGGGCCAATG GCTGGTTATA CCCTTGGTCT TGTGTATCGG ATACTTGTTA ACTAAAAGCT TTATAAATAT TTTATCGAAG CGTATGCTTG CCCGGAATAT GGACCCCAAT CAGATTCATC TCATTAGAAG AATTATCTAT GTTTTAGCCA TTTCCATTTT ATTAATCACT GTCTTAGATT TGATCAATAT TCCTATTGCC GCTTTTGCCT TTCTCTCCGG TGCGATCGCA ATCGGGTTTG GTTTTGGTGC GCAAAACATT ATTAATAATT TTATCAGCGG TTGGATTTTA ATGTGGGAAC AACCAATTCG AATTGGAGAT TATTTAGAAG TTGATAATGC CAAAGGAGTC GTGGAGGAAA TTAATACCCG TTCAACAAGA ATTAGACGAG TTGACGGCGT TCACCTGTTG ATTCCTAACA GTAAATTATT AGAAAATACC GTGGTAAACA GAACACTTGT TGATCATATT ATGCGTACCT CTGTGTCTGT CGGGGTTGCC TATGGCTCAC CCGCTAAACA GGTGGCAGCT TTAATTCTGC GCGCGGCTAA AGAGCAATCT ATTATCTTGG AAAATCCGCC ACCCGTGGTT ACTTTTGAAG ATTTTGCTGA CAACTCTCTG GTCTTTGAAG TCAACTTCTG GATAAATGCA ACCGTCGATG GCAGTTTACG AGCGGTCAGA AGTAACGTCC GTTTTCGTCT TGATGAGCTC TTTGCCGAGC ACAATATTGT GGTTGCATTC CCACAACGAG ATCTGCATAT AGACGGCAGT TTAACGCTGC TTAAAAATCC ATTAAAAGTC GCTTATGAAC GATAA
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Protein sequence | MQLDAVLKIL NYPTISLVGQ TITVGQWLVI PLVLCIGYLL TKSFINILSK RMLARNMDPN QIHLIRRIIY VLAISILLIT VLDLINIPIA AFAFLSGAIA IGFGFGAQNI INNFISGWIL MWEQPIRIGD YLEVDNAKGV VEEINTRSTR IRRVDGVHLL IPNSKLLENT VVNRTLVDHI MRTSVSVGVA YGSPAKQVAA LILRAAKEQS IILENPPPVV TFEDFADNSL VFEVNFWINA TVDGSLRAVR SNVRFRLDEL FAEHNIVVAF PQRDLHIDGS LTLLKNPLKV AYER
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