Gene Ping_2723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2723 
Symbol 
ID4626385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3338771 
End bp3340429 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content41% 
IMG OID639797846 
Productpeptidase S1 and S6, chymotrypsin/Hap 
Protein accessionYP_944032 
Protein GI119946352 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5640] Secreted trypsin-like serine protease 
TIGRFAM ID[TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.547831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0221435 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTACT TCGTAATAAA TTTATTGAGA GTATTCTTAC TGGTTATATG CGTTCATTAT 
TCTTCAGCAT CTGCCCGTGA AATTTCTTTT CGTATTGTTG GCGGCCAGGA AAGTCAAGTT
AACGACTGGC TCTGGGTAGT TAGCCTAAAA AATAATGTCA CCCAAAATCA TTTTTGTGGC
GGATCATTAA TAGGCGATCG GTGGGTATTA ACTGCGGCTC ACTGCTTATT TAAAAGTGGG
AACCTGAAAT TGGCATCGCA ACTCACTGCA ACTGTTGGTG AATATGACTT AAGCTCAGCC
ATGGTTACGC CTGCGAGAAG GATTCAGCAG ATCTACATCC ACCCGGATTA CAACAGCTCA
ACAAGCGTTA ATGATATTGC ACTGTTAAAA TTGGCCTCAA GTGTTAATAA TCCAATCTTC
ATTTCTCCCG CAGACAATGA AGTGACAAAA AAAGCCCTTG CTGCAACCGA ATATGTGACG
GTACTCGGTT GGGGGTCAAC GATCCCCTAC AGCTCTTATG GACCGATCAC CTATAATTTT
CCTAATATTT TGCATGATGT CGAAATTCCG CTAATGACTG ATGCAATGTG CACCAAAACA
TTAGGCAGTA CTTATACGGC AGAAATGATT TGTGCAGGTT TACCTGAGGG TGGAAAAGAC
AGCTGCCAGG GTGATAGTGG TGGCCCATTA GTGATTCAGG AAAATGGCTG GAAACAGATT
GGCATTGTTA GCTGGGGATT TGGTTGTGCA ACTCCCGGCC ATCCCGGCGT TTATACACGA
TTAGCCTTAT ACAGCGAATG GGTAAACAGC ATCAGCCGAA GAATTTATTT ACCTCCTGAT
TTTGAATTCA ATAATACTTT TATTGGTGAA AGCCATTCAG AAACCATCAT TATAGAAAAT
AATTCCGAGT ATAACGCAAG CTTAATTTTT ACTGCAGAGG GGAGTAATTA TTTCTCCTAC
AATGCTTCAG ATTGCGCTTT TATTGAAACT AATAAGAGCT GCGGTTTAAT CATCACCTAC
AGCCCGTCGA ATACAAATAT AAGTCACAAG AGCATCACCA TCAACAGTGA GCGACGAGAT
TCAACAGCCC TGCAATTATC TTTACTTGGT TTGCCGCTTA GAGATGCGAC CGGAATAGCA
ACGGCAGCGG CTTTTCAAAT AGAAAATATT GCCTGGTTTA CCGGCGGTTA TGCCCCCTGG
CAATTAACTC CGGCTGATAA TACTTTACAA TCTGGTGATA TTGCAAATAA TGAAAAAAGC
TTATTAAAGG CGCAAGTGAC AGGCTCAGGA AAATTGAGCT TTGACTGGGC AACTCAATCT
GAAAGCGGAT TCAATAAATT ATTTCTCACA GTTAATGGCG TGATTTATAG CATGATCGAC
GGCGCTGAAT ACTTTAATAC ATATAATGTT TATTTGAATA AAAAGGTGAA TGAGGTTATC
TGGCGTTACG AAAAAAAGAC AACTGTCTCA ACCTTAGCCG ATCGAGCTTA TGTCGCTAAT
GTGACTTTTG AGGAGATGAC TAAGGATGAG TTTGATCTAT GGGCAGAGCG AAACGAAGTG
ACAATGAGTA ACTCAGGTGG GGGTGCAATG GGCTGGTTAA GTTTTTTATT ATTACCCCTC
CTGTTTGGTC GCCACTTTTA CAAATTCAGA GAATATTAG
 
Protein sequence
MKYFVINLLR VFLLVICVHY SSASAREISF RIVGGQESQV NDWLWVVSLK NNVTQNHFCG 
GSLIGDRWVL TAAHCLFKSG NLKLASQLTA TVGEYDLSSA MVTPARRIQQ IYIHPDYNSS
TSVNDIALLK LASSVNNPIF ISPADNEVTK KALAATEYVT VLGWGSTIPY SSYGPITYNF
PNILHDVEIP LMTDAMCTKT LGSTYTAEMI CAGLPEGGKD SCQGDSGGPL VIQENGWKQI
GIVSWGFGCA TPGHPGVYTR LALYSEWVNS ISRRIYLPPD FEFNNTFIGE SHSETIIIEN
NSEYNASLIF TAEGSNYFSY NASDCAFIET NKSCGLIITY SPSNTNISHK SITINSERRD
STALQLSLLG LPLRDATGIA TAAAFQIENI AWFTGGYAPW QLTPADNTLQ SGDIANNEKS
LLKAQVTGSG KLSFDWATQS ESGFNKLFLT VNGVIYSMID GAEYFNTYNV YLNKKVNEVI
WRYEKKTTVS TLADRAYVAN VTFEEMTKDE FDLWAERNEV TMSNSGGGAM GWLSFLLLPL
LFGRHFYKFR EY