Gene Ping_2641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2641 
Symbol 
ID4624369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3239736 
End bp3240323 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content45% 
IMG OID639797770 
Productphage tail collar domain-containing protein 
Protein accessionYP_943957 
Protein GI119946277 
COG category[S] Function unknown 
COG ID[COG4675] Microcystin-dependent protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.262211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCAT TGATTAGAAA ACTCACATTA GGCTTAGCTG TTGCTACAAG CCTTTTAAGC 
ACCTCACCGT CTTTTGCAGA ACCGTTTTTA GGCGAAATTG CTTGGGTGCC TTATAACTTT
GCACCACGAG GCTGGGCTTC CTGTGATGGA CAGCTTTTAC CTATTACTCA ACATAACGCA
CTTTTTTCAT TACTAGGTAC TGTCTATGGT GGTGACGGCA GAACTACTTT TGCATTGCCG
GACGCACGCG GCAGGGTCAT GATACACGAA GGTCAGGGAC CGGGTTTAAC AAATAGAAGG
CTTGGCGACA AATGGGGAGA AGAACAAGTC ACATTACAGA CATCCCAAAT TCCAAGTCAT
ACTCACAGAC AACAAGCCAG CAGCGGTTCA CCTTCGAGTA CAAGCCCTGA GGAGAATGTA
CTAGCCAGCC CTTCAAGAAC ACAACTTTAT GCTGATGATG CTGATATTGA TATGTCAGCA
GATAATATCA GTTATACGGG TGGAAACTTA GCACATAATA ATATGCAGCC GTACACAACA
TTGCATTGCA TCATTGCGTT AGTCGGCATA TATCCGTCGA GAAATTAG
 
Protein sequence
MKPLIRKLTL GLAVATSLLS TSPSFAEPFL GEIAWVPYNF APRGWASCDG QLLPITQHNA 
LFSLLGTVYG GDGRTTFALP DARGRVMIHE GQGPGLTNRR LGDKWGEEQV TLQTSQIPSH
THRQQASSGS PSSTSPEENV LASPSRTQLY ADDADIDMSA DNISYTGGNL AHNNMQPYTT
LHCIIALVGI YPSRN