| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2613 |
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| Symbol | rpsD |
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| ID | 4624321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 3205308 |
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| End bp | 3205928 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639797743 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_943931 |
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| Protein GI | 119946251 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.872553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.744433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAGAT ATTTAGGTCC TAAGCTAAAG CTTAGCCGTC GCGAAGGAAC AGATCTTTTC
TTAAAATCTG GCGTCCGTGC GATTGAATCT AAGTGTAAAA TCGATAATGC ACCCGGTGTT
CACGGTGCAC GTAAACCGCG TTTGTCGGAT TACGGTTTGC AATTACGCGA AAAACAAAAA
GTACGTCGTA TGTACGGTGT GCTTGAAAAG CAATTTCGTA ACTACTACAA AGAATCTGCA
CGTTTACAAG GCAACACGGG TGAAAACCTG CTTCAATTAC TTGAAGGTCG TTTAGATAAT
GTTGTTTACC GTATGGGTTT TGGTGCAACA CGCGCTGAAT CTCGTCAACT AGTTAGCCAT
AAAGCTGTAC TGGTCAACGG TAAAGTTGTA AATATTCCTT CTTTTAACGT TAAAGCAAGT
GATGTTATCG CAATTCGTGA AAAAGCTAAA AAGCAATCAC GCATTGGCGC AGCACTTGAA
ATCGCCGGTC AACGTGAAGT CCCAACTTGG GTTTCTGTTG ATGCAACGAA GATGGAAGGC
GTATTTACTC GTCAACCTGA ACGTTCAGAT TTATCGGCTG AGATTAACGA ACAGTTGATC
ATCGAGCTTT ACTCTAAGTA A
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| Protein sequence | MARYLGPKLK LSRREGTDLF LKSGVRAIES KCKIDNAPGV HGARKPRLSD YGLQLREKQK
VRRMYGVLEK QFRNYYKESA RLQGNTGENL LQLLEGRLDN VVYRMGFGAT RAESRQLVSH
KAVLVNGKVV NIPSFNVKAS DVIAIREKAK KQSRIGAALE IAGQREVPTW VSVDATKMEG
VFTRQPERSD LSAEINEQLI IELYSK
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