| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2550 |
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| Symbol | |
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| ID | 4624197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 3120371 |
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| End bp | 3121609 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639797676 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_943870 |
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| Protein GI | 119946190 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.665651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.63887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA AAAAACACAT TGCTAGCAAA AAGCTTTCTT TAAGTAAGGA AAATAAACTA
CTGCGTGAGA AGGCTGAACT CATCGCGAGC AAAAAAATGG CGGCGCAGCC GGTGGATATC
ACCCGATTGA GTAGTGAGCA AATTGAGGGA CTGCTCCATG AGTTGAGCGT ATTTCAGATA
GAACTGGAGA TACAAAATGA AAATTTGCTG ACCGCCTATG AACAGCTGGA AGTTTCACGT
AAACGTTATA TTCAGCTTTA CAATTTAGCG CCTGTGGGAT ATTTTTCGCT GACCAAAAAT
GGCATTATAC TCGAAGCTAA CAACACCGGT AGCGAGTTAT TAGCTTGCAC TGTCTCCATC
CTGCTACAAT TACCCTTTGC TAAATTTATC TACCACGAAG ACACCGATAA GTTTTACCTT
TTTTGTAAAG AGATTATGAA CACGCAGCAA CCGCAGGTTT GTGAACTAAA AATTAATCGC
CACGACAACA CCTCATTTTG GGGCTATCTG GTGGCGGCTT CAACCGTTGA CGAACACGGT
GAGCAGATCC TTTTTTTAGT CTTAAATGAT ACGACTGAGC GACACAATCA TGTTGATGAA
ATTAGCCGGC TGGCCTTTTT TGATCCGCTC ACTGGCCTGC CCAATCGGCG TTTATTGTTG
GACAGACTTA ACCACGCCGT TATATCAACC GATCGTAATG GAAAATTAGG GGCAGTAATG
ATGCTTGATC TGGACAACTT CAAGCAGCTC AATGATACAA AGGGGCACGC CGACGGCGAT
ATGTTATTGC AGCAGATAGC CATCCGGCTG CAGAAATGTG TGCGCAAAAA TGACAGCTTG
GCCCGTTTAG GGGGGGATGA ATTTGTGGTC TTGCTGGAGG GGCTAAGCGA AAATACAGTA
GAGGCGAACA GCGAAGCTAT GCATATAGCA AAGAAAATAC AGCACGAATT TTCACTCCCA
TTTATATTCT GTGATTACAC TCACTACATT ACGGCGAGCA TAGGCATAAC AATATTTATG
CAAAAAACAG AAAATGTAGA CAACTTACTC AAAAATGCCG ATGTGGCTAT GTATAAGGCA
AAGGCGGCGG GACGTAATAA AATATGTTTT TTTGAAGCCC CTATGCAGAC AATAACAGAG
TCACATTCTC ACATAGAAAA AGATCGGCAT TACGCTCAGG AAGATAAAAA AATTCGTGCA
GCATTACCAG ATTCAATAGA GAAAAATAAC GCGAGGTAA
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| Protein sequence | MSKKKHIASK KLSLSKENKL LREKAELIAS KKMAAQPVDI TRLSSEQIEG LLHELSVFQI
ELEIQNENLL TAYEQLEVSR KRYIQLYNLA PVGYFSLTKN GIILEANNTG SELLACTVSI
LLQLPFAKFI YHEDTDKFYL FCKEIMNTQQ PQVCELKINR HDNTSFWGYL VAASTVDEHG
EQILFLVLND TTERHNHVDE ISRLAFFDPL TGLPNRRLLL DRLNHAVIST DRNGKLGAVM
MLDLDNFKQL NDTKGHADGD MLLQQIAIRL QKCVRKNDSL ARLGGDEFVV LLEGLSENTV
EANSEAMHIA KKIQHEFSLP FIFCDYTHYI TASIGITIFM QKTENVDNLL KNADVAMYKA
KAAGRNKICF FEAPMQTITE SHSHIEKDRH YAQEDKKIRA ALPDSIEKNN AR
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