Gene Ping_2541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2541 
Symbol 
ID4623749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3106444 
End bp3107223 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content54% 
IMG OID639797667 
Productacetoin reductases 
Protein accessionYP_943861 
Protein GI119946181 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR02415] acetoin reductases 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0776085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTT CAGGAAAAGT GGCACTTGTC ACTGGCGCGG GTCAGGGGAT AGGGCGCGCC 
ATCGCGCTGC GCTTAGCTAA GGATGGGGCT GACATTGCAT TAGTCGATCT GCAGCGTGAC
AAGATAAATA GTGTGGCTAA AGAGATTACT GCATTGGGCC GCAAGGCGGT GGTGTTTGTT
GCCGACGTTG GACAGCAGCA GGAGATGCTG GAGGCGGTCA ATTATGCGAG CAGCGAACTG
GGCGGTTTTG ATATCATGGT CAATAATGCC GGCATTGCGC AAGTAGCGCC GTTGCTTGAT
GTTACACCGG AACAAATTGA TCAGATCTTT CAGGTCAATG TACAAGGTAC GCTGTGGGGC
ATTCAGGCCG CAGCCAAAAA ACTAAAAGCC TTGAAGCGGC ATGGCAAGAT CATTAATGCA
TGTTCAATTG CCGGCCATGA TGGCTTCGCA ATGCTGGGAG TCTATTCATC CACCAAGTTC
GCCGTGCGTG CCTTGACGCA AGCGGCTGCC AAGGAACTCG CAGCCGATGG CATTACCGTC
AATGCGTATT GTCCCGGTGT GGTTGGCACC GATATGTGGG TCGATATCGA CCAGCGTATG
TCTGATATCA CTGGTGCCGA AGTGGGCAGT ACATACAAGC AATACGTCGA GGGCATCGCG
CTTGGGCGCG CCGAAACACC GGAAGATGTT GCTGGCTTTG TATCCTTTCT GGCGGGCCCG
GATTCCGATT ATATGACGGG CCAGTCACCC TTAATCGATG GCGGCTTGTT GTACCGCTGA
 
Protein sequence
MSISGKVALV TGAGQGIGRA IALRLAKDGA DIALVDLQRD KINSVAKEIT ALGRKAVVFV 
ADVGQQQEML EAVNYASSEL GGFDIMVNNA GIAQVAPLLD VTPEQIDQIF QVNVQGTLWG
IQAAAKKLKA LKRHGKIINA CSIAGHDGFA MLGVYSSTKF AVRALTQAAA KELAADGITV
NAYCPGVVGT DMWVDIDQRM SDITGAEVGS TYKQYVEGIA LGRAETPEDV AGFVSFLAGP
DSDYMTGQSP LIDGGLLYR