Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2541 |
Symbol | |
ID | 4623749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3106444 |
End bp | 3107223 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639797667 |
Product | acetoin reductases |
Protein accession | YP_943861 |
Protein GI | 119946181 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR02415] acetoin reductases |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0776085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTT CAGGAAAAGT GGCACTTGTC ACTGGCGCGG GTCAGGGGAT AGGGCGCGCC ATCGCGCTGC GCTTAGCTAA GGATGGGGCT GACATTGCAT TAGTCGATCT GCAGCGTGAC AAGATAAATA GTGTGGCTAA AGAGATTACT GCATTGGGCC GCAAGGCGGT GGTGTTTGTT GCCGACGTTG GACAGCAGCA GGAGATGCTG GAGGCGGTCA ATTATGCGAG CAGCGAACTG GGCGGTTTTG ATATCATGGT CAATAATGCC GGCATTGCGC AAGTAGCGCC GTTGCTTGAT GTTACACCGG AACAAATTGA TCAGATCTTT CAGGTCAATG TACAAGGTAC GCTGTGGGGC ATTCAGGCCG CAGCCAAAAA ACTAAAAGCC TTGAAGCGGC ATGGCAAGAT CATTAATGCA TGTTCAATTG CCGGCCATGA TGGCTTCGCA ATGCTGGGAG TCTATTCATC CACCAAGTTC GCCGTGCGTG CCTTGACGCA AGCGGCTGCC AAGGAACTCG CAGCCGATGG CATTACCGTC AATGCGTATT GTCCCGGTGT GGTTGGCACC GATATGTGGG TCGATATCGA CCAGCGTATG TCTGATATCA CTGGTGCCGA AGTGGGCAGT ACATACAAGC AATACGTCGA GGGCATCGCG CTTGGGCGCG CCGAAACACC GGAAGATGTT GCTGGCTTTG TATCCTTTCT GGCGGGCCCG GATTCCGATT ATATGACGGG CCAGTCACCC TTAATCGATG GCGGCTTGTT GTACCGCTGA
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Protein sequence | MSISGKVALV TGAGQGIGRA IALRLAKDGA DIALVDLQRD KINSVAKEIT ALGRKAVVFV ADVGQQQEML EAVNYASSEL GGFDIMVNNA GIAQVAPLLD VTPEQIDQIF QVNVQGTLWG IQAAAKKLKA LKRHGKIINA CSIAGHDGFA MLGVYSSTKF AVRALTQAAA KELAADGITV NAYCPGVVGT DMWVDIDQRM SDITGAEVGS TYKQYVEGIA LGRAETPEDV AGFVSFLAGP DSDYMTGQSP LIDGGLLYR
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