Gene Ping_2514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2514 
Symbol 
ID4626603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3072932 
End bp3074521 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content34% 
IMG OID639797640 
Productvon Willebrand factor, type A 
Protein accessionYP_943834 
Protein GI119946154 
COG category[R] General function prediction only 
COG ID[COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.513859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.782671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATT ATGCAACTTC TGTGGGAACC TCATTAGAGA ATAAATATAG CAATTTATTT 
AAAAAAAACA CTTCTCTATC TGTGTTGATG GCAGGGAAGC TGACTGAATT CAATAATCAT
GTTGAACGTG AAATAAGTAC TAAATTTGAT TTATCACATT TTGAATTATT ATTGGAAAAA
TCAGAACAAA GCTTACTATC ACATAATAAA TCAAATCATA TTGAGTCTGC ACAAGAAGAT
TATAAGCATT ACACTCAATT CGTGAATCAA GCAAAACTTC ACCTTAATCC CTATTGGGGG
AAAGTAATCC ATGCCTTGAG TGAAAAGGTA AGCGTAAAAG AAAAAATTGA ACCTAAGGTT
GAAAATAAGC ATTCCAAAGA CCAACGCTAC TTTGCGATGG TAAGCACTTC TAAGAGGAAA
ACACTGCAAA ATAAAGTGAC TGCGGCTTTA GATCCTTTAC TGACCAGAAC ACACCTGCTC
GGCGAATGGC GCAAACAAAT AGAGCAGAAG CGTGTGGAGT GGGAATTAAA TTTAATTCAC
AAACTACAAC AAAAGTTTTT AGAAAAAATG GAAGAATGGC TTCGTTATTT GAGTGCGTTA
ATTAATTCCA TTGATGATAT TGGATTTGAT CTGGGCTACT TTTTGGATTT TTCAAAGGGT
GAGCTCTCTG AATCGGACAT TGAGCAAATA AAAAAGTGGC TTAACTATAT TCAAAATGAC
AAAGGAGCTC AATTATTATG CGACTTATTA GGTAAGATTC GCCAAGTAAG TCATTCTGAT
AAAATTGAAA TTGCCAATAA AATAATTGAT GTCCCATCTC AGTATATTGA TTCTAATTCA
AAAGAAGAAA TTGTAGGTAT CAAATTAGGT CAAGAATTAG AGCATGTTTT ACCGTCAGAA
TTTGCTTTAT TATCTGATCC TTCAACGTCC ATTTTATTTG ACTTAAAGTA CATTGAATCT
CGCTTGATGT GTTTTGATAT GGTTGGGATT CAAAATTCAG TTGATCAAAT TGAAATTGAA
GAAGAAGTGA CGGTCCAAGA AGAAAATACA AAAGGCCCGA TGGTTATCTG TGTTGATACA
AGTGGTTCGA TGCATGGTTC TCCGGAAGCA ATAGCAAAAG CTGTAACCCT TTTCTTATCG
TCAACAGCAC AAAAAGAAAA GCGCGACTGT TATTTGATCA ACTTCTCAAC TAGCATTGAA
ACACTCGACC TGTCAGGTAA TTATTCAATT AAAACATTAA TTGATTTTCT TCGTAAATCA
TTTCATGGCG GGACTGATGT TGCTCCTGCT ATCAACCATG GTCTTAAAGT AATGCAAAAC
GATACTTATG AAAATGCTGA TATGCTTATT ATTTCAGATT TTGTTATGTC GTATTTACCA
GACAAAACAG TCAAAAACAT TGGGGTATTA AGAGAGTCCG GAAATCGTTT TTACTCTCTT
TGCATAGGCA ATGCATTTAT GTCCAATCGT TTATCAGCGA TTTTTGATAG AGAGTGGATA
TATAATCCGG CAACGACAAG TATAAAAGAG TTAATTGGTT TTCAATGTGA GGTTGAAAAC
GCTATGAAGG AAAACAACGT TATTATTTAA
 
Protein sequence
MTDYATSVGT SLENKYSNLF KKNTSLSVLM AGKLTEFNNH VEREISTKFD LSHFELLLEK 
SEQSLLSHNK SNHIESAQED YKHYTQFVNQ AKLHLNPYWG KVIHALSEKV SVKEKIEPKV
ENKHSKDQRY FAMVSTSKRK TLQNKVTAAL DPLLTRTHLL GEWRKQIEQK RVEWELNLIH
KLQQKFLEKM EEWLRYLSAL INSIDDIGFD LGYFLDFSKG ELSESDIEQI KKWLNYIQND
KGAQLLCDLL GKIRQVSHSD KIEIANKIID VPSQYIDSNS KEEIVGIKLG QELEHVLPSE
FALLSDPSTS ILFDLKYIES RLMCFDMVGI QNSVDQIEIE EEVTVQEENT KGPMVICVDT
SGSMHGSPEA IAKAVTLFLS STAQKEKRDC YLINFSTSIE TLDLSGNYSI KTLIDFLRKS
FHGGTDVAPA INHGLKVMQN DTYENADMLI ISDFVMSYLP DKTVKNIGVL RESGNRFYSL
CIGNAFMSNR LSAIFDREWI YNPATTSIKE LIGFQCEVEN AMKENNVII