Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2443 |
Symbol | |
ID | 4626409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2991148 |
End bp | 2992281 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639797578 |
Product | succinyl-diaminopimelate desuccinylase |
Protein accession | YP_943773 |
Protein GI | 119946093 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.461656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0916444 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGACA GCCCAGTTTT GGCTCTTTTA AAAGACTTAA TAAGCCGACG TTCGATTACC CCAAGCGACG AAGGGTGCCA GCAGTTATTA ATATCTAGAC TTGAAAAATT AGGCTTTGAG TGTGAAGTAA TGATCTTTGC AGATACTACC AATTTATGGG CACGCAGAGG CACAGAAAAA CCGCTTTTTT GTTTTGCGGG ACACACCGAT GTGGTACCAA CCGGCCCTGA AGAAAATTGG ACTTACCCTC CCTTTGAGCC AACCGTTGTC GATGGTTTTT TATTTGGCCG TGGCGCTGCG GATATGAAAA GTGGTATTGC CGCTTTTATC ATTGCGTTAG AGCAGTTCAT CAAAGCACAC CAGGATCACC AGGGTTCCAT TGCCTTACTT ATCACCAGCG ATGAAGAGGG ACCTTTTATC AACGGCACAG TGCGCGTAAT TGAAACACTT GAAGCGCGCA ATGAAAAAAT AGATTATTGT ATTGTTGGAG AGCCCTCAAG CACAGAGCAT GTGGGTGATA CTATTAAAAA TGGTCGCAGA GGGTCATTAA CGGCCGATTT AACCATTAAT GGCGTACAGG GTCACGTGGC TTACCCGCAC ATGGTCGAAA ACCCTATTCA TACCTGCATC GGACCGCTCA CTGAGTTATC ACAGATGGAG TGGGATAAGG GTAATAAGTA TTTCCCACCA ACCAGTTTTC AGGTAACCAA TTTTAATGCT GGCACGGGCG CGAGTAATGT TGTTCCTGGA GAAGCACAGA TTCAGTTTAA TTTTCGTTAT TCGACCGAGT TAACAGCCGA GATGATAATT GCACGTGTGG TAGCTATTTT GCAAAAACAT AAGCTTAATT ACCAGATTAA GTGGACTTAT AACGGCTCAC CATTTATTAC CCAACCAGGT TCGTTGACTA ATGCCGTAAG TGAGGCTATC TTTGCTGTCA ATGGATTAAC AACTGAGCTT TCCACCAGTG GTGGGACCTC CGATGCACGT TTTATTGCAC CGACAGGAGC GCAAGTTGTT GAACTGGGTC CCGGCAATAA AACCATTCAC AAAGTGAATG AATCAGTAAA AATTGCCGAC CTGGAGGAGC TGGTACATAT TCACCGGCTG ACTCTGGAAA AATTGTTAAC ATGA
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Protein sequence | MSDSPVLALL KDLISRRSIT PSDEGCQQLL ISRLEKLGFE CEVMIFADTT NLWARRGTEK PLFCFAGHTD VVPTGPEENW TYPPFEPTVV DGFLFGRGAA DMKSGIAAFI IALEQFIKAH QDHQGSIALL ITSDEEGPFI NGTVRVIETL EARNEKIDYC IVGEPSSTEH VGDTIKNGRR GSLTADLTIN GVQGHVAYPH MVENPIHTCI GPLTELSQME WDKGNKYFPP TSFQVTNFNA GTGASNVVPG EAQIQFNFRY STELTAEMII ARVVAILQKH KLNYQIKWTY NGSPFITQPG SLTNAVSEAI FAVNGLTTEL STSGGTSDAR FIAPTGAQVV ELGPGNKTIH KVNESVKIAD LEELVHIHRL TLEKLLT
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