| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2430 |
|---|
| Symbol | |
|---|
| ID | 4626396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 2978453 |
|---|
| End bp | 2979103 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639797566 |
|---|
| Product | ABC polar amino acid transporter inner membrane protein |
|---|
| Protein accession | YP_943761 |
|---|
| Protein GI | 119946081 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.891065 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0353371 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAAT TTACAGACTG GGATATTTTA AGAAATTTAT TGTTTGCAGC GCGTTGGACA
TTGCTGCTTT CTCTCTTTGC TTTTATTGGC GGAGGCCTGG TAGGGCTGGC TTTGACCTTT
ATAAGAAGTA TTAAAAATCC GTTTCTGACC AAACTGGTGC AAATTTACGT GGAGTTATTT
CAGGGAATTC CATTATTAAT GCAACTGTTT TTAACCTTTT TTGGTTTGTC TTTAATTGGC
CTTGATGTTG ATGCCTGGTC TGCCGCTATT TTATCACTGA CTTTATTCAG CAGCGCTTTT
TTGCATGATA TTTGGCGTTC ATGCATTGAA GCCTTACCTA AAGGTCAATG GGAAGCTTGC
AGAACATTAG GCCTCACTCA TGTGCAAAGT ATGCGTCATG TCATTTTTCC TCAAGCTATA
AAAATGGCAA TTGCACCCAC CGTTGGATTT TCTGTGCAGA TTGTTAAAGG CACGGCATTG
GCATCGATTA TTGGTTTTGT TGAATTAACC AAAGCGGGCA CCATGCTAAA TAATGCCACA
TTTCAACCCT TTAAAGTATT TGCGCTGGTC GCTTTGCTGT ATTTCGTTAT CTGTTTCCCT
TTGTCTGTTT TAGCCCGCTA TCTGGAGAAT AAAAATTATG TACGTCGTTA G
|
|---|
| Protein sequence | MMQFTDWDIL RNLLFAARWT LLLSLFAFIG GGLVGLALTF IRSIKNPFLT KLVQIYVELF
QGIPLLMQLF LTFFGLSLIG LDVDAWSAAI LSLTLFSSAF LHDIWRSCIE ALPKGQWEAC
RTLGLTHVQS MRHVIFPQAI KMAIAPTVGF SVQIVKGTAL ASIIGFVELT KAGTMLNNAT
FQPFKVFALV ALLYFVICFP LSVLARYLEN KNYVRR
|
|---|
| |