| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2383 |
|---|
| Symbol | |
|---|
| ID | 4624036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 2899906 |
|---|
| End bp | 2901606 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639797521 |
|---|
| Product | dextran glucosidase |
|---|
| Protein accession | YP_943719 |
|---|
| Protein GI | 119946039 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATTG TGATGACAAT GGATGCTAAA AAAAATGAGA CTGGCACAGT ACCTGAATCA
GATAAAAAAT GGTGGCATAA TGCCGTCGTT TATCAGATCT ACCCTCATAG TTTTATGGAT
GCCAATCATG ATGGCATAGG CGATTTGGCG GGGATCATCA GTAAACTTGA TTACCTCAAG
CAATTAGGCA TTAATGTTAT CTGGTTATCG CCGGTGTTCA AGTCTCCGAT GGATGATAAC
GGTTATGATA TTTCCGACTA TCAGGATATC GCCTCAGAAT TCGGCACGTT AGAGGAAATG
AATAAGCTGA TTGCTGAAGC TGCGAAACGT GATATCCGTA TTATTATGGA TCTGGTGATC
AACCACAGCA GTGACGAGCA TCCCTGGTTT ATTGAGTCAA GAAAATCTAA AGATAACTTT
TATCGCGATT ATTACATTTG GCGTGAGCCA AAAGCCGATG GCTCAGCGCC GAATGATTTC
AAATCTTATT TTGGCGGCAG TGCTTGGGAG TTTGATGGTA CTACGGGGCA ATATTATTTC
CACCAGTTCT CTAAAAAGCA GCCGGATCTA AACTGGGATA ATCCCAAGGT GCAGGAAGAG
GTGCATAAGA TGATCAACTG GTGGTTAGAC CGTGGCATAG GTGGTTTCCG GATGGATGTG
ATCGACTTGA TTGGCAAGGA TGTGGATAAG CAGATTATGA CCAACGGGCC GCGCCTGCAT
CCACTATTGC AAGAGATGAA TAAAGCAACT TTTGGTGGGC GCGATTTACT GACCGTCGGT
GAAGCGTGGA GCGCAACCCC GGAGACTGCC AAGCTGTATT CCGATCCGGC CCGCGATGAA
CTCTCCATGG TGTTTCAGTT TGAGCATATC ACCATCACCT TTGATCCCGA GCAAGGTAAA
TGGAAACCTC GGCCGTTTGA TCTGCTGGAG TTCAAGCAGG TAATCAGCAA GTGGCAAACT
GAACTTGCTG ATTGTGGTTG GAACTCGTTG TTCTGGAATA ACCATGATCT GCCGCGCGCG
GTTTCAAAAT ATGGCGATCC GGGGTGCTAC CGCGTGCAGT CCGCTAAAAT GCTGGCGACT
GCGCTGCATT TCCTCAAAGG TATACCGTAT ATCTATCAGG GAGAAGAGAT AGGCATGACC
AATGTGCATT TCGATGCCAT TGAGGATTAT CAGGATATTG AAACCCTGAA TCTTTATCAG
GAGCGTATTG CAGCGGGCGT CTCGCATGAG GATATGATGC AGGGGATCCA TGAAAATGGT
CGTGACAATG CCCGCACACC TATGCAGTGG GATAGCAGCC TTAACAGCGG TTTTAGTGAT
GGTAACCCCT GGCTTAAGCT CAATCCAAAT TATACCGAAA TTAATGTCGA GTCGGCATTG
GATGATCCTG ATTCCATTTT TTACCACTAC CAAAAACTGG TTCAGTTGCG CAAGACCCAC
GAGGTAATGG TCTATGGTGA TTATCAGCCA TTGTTTGTTG AGCATAAAAA GGTATTTTCC
TACCAGCGGC AGTTAGGTAA TGAGAAAGTT ATCGTTATTA ATAACTTCAC GAATGAGCCG
CTGGAGCTGA CCTTGCCAAA ACCACTGCAG GGATTGAAAG GGCAATGCCT GATTAGCAAT
TATGCGCCGC GTAAGCAGTT AAGCGAGTCA CTCGCGCTTG CACCCTATGA GTCTTTTGCA
CTGCTCATTA AGCCGTGTTA A
|
|---|
| Protein sequence | MTIVMTMDAK KNETGTVPES DKKWWHNAVV YQIYPHSFMD ANHDGIGDLA GIISKLDYLK
QLGINVIWLS PVFKSPMDDN GYDISDYQDI ASEFGTLEEM NKLIAEAAKR DIRIIMDLVI
NHSSDEHPWF IESRKSKDNF YRDYYIWREP KADGSAPNDF KSYFGGSAWE FDGTTGQYYF
HQFSKKQPDL NWDNPKVQEE VHKMINWWLD RGIGGFRMDV IDLIGKDVDK QIMTNGPRLH
PLLQEMNKAT FGGRDLLTVG EAWSATPETA KLYSDPARDE LSMVFQFEHI TITFDPEQGK
WKPRPFDLLE FKQVISKWQT ELADCGWNSL FWNNHDLPRA VSKYGDPGCY RVQSAKMLAT
ALHFLKGIPY IYQGEEIGMT NVHFDAIEDY QDIETLNLYQ ERIAAGVSHE DMMQGIHENG
RDNARTPMQW DSSLNSGFSD GNPWLKLNPN YTEINVESAL DDPDSIFYHY QKLVQLRKTH
EVMVYGDYQP LFVEHKKVFS YQRQLGNEKV IVINNFTNEP LELTLPKPLQ GLKGQCLISN
YAPRKQLSES LALAPYESFA LLIKPC
|
|---|
| |