Gene Ping_2350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2350 
Symbol 
ID4623556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2860289 
End bp2861890 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content46% 
IMG OID639797489 
Producthypothetical protein 
Protein accessionYP_943688 
Protein GI119946008 
COG category 
COG ID 
TIGRFAM ID[TIGR03605] SagB-type dehydrogenase domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00119506 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCCAAG CCGCCTTGCA AACAATCAAA GATTACCACC AGCAAACTAA ACATCAGCCT 
GGCCGATATG CGCGTTCGCC AGGTTATATG GACTGGGCAA ATCAGCCATT ACCCTACCGG
CTTTACGAAG GTGCACCACA AATCCCTTTA CCACTGTTAC AGCAAACGAA AGATCTTCCC
TATTCCGCGC TCTTTCAGAG GGTCGAAAAA AAAGCTGAAT CCATTTCTAT CGCATCCATT
GCCAGTATGC TCGAGCTCAG CTTAGGGCTT TCAGCCTGGA AAGAGTATCA AGGTTCAGAA
TGGGCACTGC GTATCAATCC TTCCAGTGGC AATTTACATC CTACCGAATG TTATTTACTG
CTGCCGGAAG TCGATCAGCA AGCGGCTGCC AGTGTGCATT ACAACCCCTA TGTTCATCTG
CTTGAACAGC GCGCAACAAT ACCCGATGAT GCAGCACAGT CATTAAAAAA GATGGATGGT
TTTCCCTTGA TGCTAAGCAG TATTGCCTGG CGGGAGGCAT GGAAATATGG TGAGCGAGCT
TACCGTTATT GTCAGCATGA TTTAGGCCAC GCCTTAGCGG CATTAAACAT TGCCTGTAAC
CTCAATGGCT GGCAGATTCA GGTATTGCCA AATATTTCTG ATGAAAAGGC AGAAAGTGTC
TTTGCGCTTG CACAATCAAA CGGTGTGCAG GCAGAAACCG AGTTTGCCGA TTGTGTCTGC
TGGGTGAGCC GGACAACACC TGACTTAGTC GCTATTGATC AATGGTTTGA CCGGCTTCCG
AAGCTTAATT ATGCACACTC GGCGAATCAA CTGAGCAAGG TACATATCGA CTGGCCAACG
ATTCACCAGG TATTCTCATC CAGCCACCAG GAGCGTTTAA CACTCACACC CGCCAAAAAA
ACCAGCGTCA TTGACCCGGA CACAAATAGC CTTTGCACAG CCAATGCTGA AACACTTATT
CGCCAACGCC GCAGCGCACA AAGTTATGAT CAAGCAAGCA GTCACCTGCC GTTAAACACC
TTTTTACATA ACCTGCAAAA AACCCTGCCC GGCAATACTA TCCCCTTTTC AGTTTTACCT
TTCGAAGCAC AGCTGGATCT TGTTTTGTTT GTCCATAACG TCCAGGGACT AGAATCAGGT
TTGTATATTT GGGTACGAAA TGAGGCGCAT CTGCCATTAT TAAAAGCGCA AATGGACAGT
GACTTTGAGT GGACAGAGGT GATTAAACAA CAACCTTTGT ATTTATTACA ATCTGGCAAT
TTGAGAAGAA TTGCCACAGC AGTTAGCTGT CAACAGGATA TCGCCGGTGA AAGTGCTTTT
TCATTGGCTA TGCTGGCAAA TTTTGCCGCA CCTTTAGAAA AATCCCCAAG CTGTTATCCC
ACTTTATATT GGGAAAGCGG ATTAATTGGC CAGGTTTTGT ATCTGCAGGC AGAAGCTTTT
GGACTGCGAG GGACGGGTAT AGGTTGTTTC TTTGATGATC AAGTGCACCA GTTACTTGGT
CTTAAGGACG ATCAATGGCA AAGCCTTTAT CATTTCACCG TTGGTAAAGC GATCGATGAT
GTGCGGATAG CCAGCAAACC GGCTTATTTT CATTTAAAAT AA
 
Protein sequence
MSQAALQTIK DYHQQTKHQP GRYARSPGYM DWANQPLPYR LYEGAPQIPL PLLQQTKDLP 
YSALFQRVEK KAESISIASI ASMLELSLGL SAWKEYQGSE WALRINPSSG NLHPTECYLL
LPEVDQQAAA SVHYNPYVHL LEQRATIPDD AAQSLKKMDG FPLMLSSIAW REAWKYGERA
YRYCQHDLGH ALAALNIACN LNGWQIQVLP NISDEKAESV FALAQSNGVQ AETEFADCVC
WVSRTTPDLV AIDQWFDRLP KLNYAHSANQ LSKVHIDWPT IHQVFSSSHQ ERLTLTPAKK
TSVIDPDTNS LCTANAETLI RQRRSAQSYD QASSHLPLNT FLHNLQKTLP GNTIPFSVLP
FEAQLDLVLF VHNVQGLESG LYIWVRNEAH LPLLKAQMDS DFEWTEVIKQ QPLYLLQSGN
LRRIATAVSC QQDIAGESAF SLAMLANFAA PLEKSPSCYP TLYWESGLIG QVLYLQAEAF
GLRGTGIGCF FDDQVHQLLG LKDDQWQSLY HFTVGKAIDD VRIASKPAYF HLK