| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2344 |
|---|
| Symbol | pepN |
|---|
| ID | 4623550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 2849181 |
|---|
| End bp | 2851823 |
|---|
| Gene Length | 2643 bp |
|---|
| Protein Length | 880 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639797483 |
|---|
| Product | aminopeptidase N |
|---|
| Protein accession | YP_943682 |
|---|
| Protein GI | 119946002 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0238159 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAG TTACCTCGAT TGAAAATACT GTAGAAAAAA ATTCAAAAGA AAAATATCTT
TCAGATTACC AAGTGTCGAA TTATGAGATA GACAGTATTG ATCTCGAATT TGAGCTTTAT
GATACGACTA CCTTAGTTAA AGCCGTGAGC TCCGTGATCC GTGTTGGTGA GCATCAGCAA
CCTCTGTTTT TATTTGGTGA GCAGTTACAA CTTAAGAAGC TGTTGGTTAA TGGTGTCAAC
CATCCGGATT ATAAGTTGGT GAAAGGGGGT TTAGAATTGT CTTATCTGCC GCAGACATTT
ACCTTGGAAA TTCATACTGA AATAAACCCG CAGGCGAATA CTTCATTTTC AGGTTTATAT
AAATCAGGTG GCGCATTTTG TACTCAATGT GAAGCGGAAG GTTTTAGGCG CATTACTTAT
TATCTGGACA GACCCGATGT AATGGCCAAA TTTACCACCA AAATCAGTGC AGACAAAGAC
TTGTACCCTT TTCTTTTATC CAATGGTAAT CCCGTTGATC AGGGCGATTT AGACAATGGT
CGGCATTGGG TTAGCTGGTC TGATCCCTTT CCAAAGCCTG CTTATCTGTT TGCTCTGGTG
GGTGGAGACT TTGATTGTTT AAAAGATACC TTTACCACCA AAAGCGGCCG CGAAGTGGCT
TTAGAGCTCT TTGTTGATAA AGGCAATTTA GACAAAACCG CCCATGCCAT GATTTCACTG
AAAAAAGCCA TGTTATGGGA TGAACAGCGC TTTAATTTTG AATACGATTT AGATATTTAT
ATGATCGTTG CGGTGGATTT TTTCAATATG GGGGCGATGG AAAACAAAGG ATTAAATATC
TTTAATTCCA AATTTGTTCT AGCGAATGCG CAAAGTGCAA CGGATCAGGA CTTTTTAGGT
ATTGAAGCTG TGATCGGTCA TGAATATTTT CATAACTGGA CGGGTAACCG AATTACCTGC
CGCGATTGGT TCCAATTGAG CTTGAAGGAA GGATTAACCG TTTTTCGCGA TCAGGAGTTC
AGTTCAGATT TGGGCAGTCG CAGTGTTAAT CGTATCGCTA ATGTAAAAAC CATGCGTAAT
CATCAGTTTG CTGAAGATGC GGGACCAATG TCACACCCGA TTCGGCCCGC TTCAGTGATG
GAAATGAATA ATTTTTATAC CTTAACCGTG TATGAAAAAG GATCTGAAGT TATTCGTATG
CTACACACTT TATTAGGTGA AAAGGCATTC CAGCAGGGCA TGGAGTTATA TGTTGCGCGT
CACGACGGGC AAGCAGTCAC CTGTGATGAT TTTATTGCCG CGATGCAAGA TGCAAGTAAG
ATTGATTTAA CCCTGTTTAA ACGTTGGTAT TCACAATCAG GCACTCCAAA TGTGCATGTC
AGCGATCATT TTGATCTGTC AAAAAACTGT TATCAAATGA CCTTTAAACA AAAAACGCAG
CCAACAGCAG ATCAAAAAAT AAAACAAGCG CTGCATATCC CTATTGCTAT TGAGTTATTA
GATAAGCAGG GCAATGCACT GAAGCTCGCT GATAATAAAA CCAATACCAT ATTGAGTTTA
ACCCATACAG AGCAGACTTT TGTATTTCAA AATATTAGCG AAAAACCGGT TCCTTCTTTG
TTCAGAGGTT TTTCAGCGCC CGTCAAATAC CAATATGCCT ACTCGGATTT ACAGCTTTTA
CATTTGATGA ATTTTGCCAG TGATGAATTT TCCCGCTGGG ATGCAGGGCA AACGTTATTT
AATAAATACT TAGCTTTAAA TGTGCAGCGT CTGCAGGATA AACAAGAGAT GAAGCTGCCG
GCACTGTTTA TTGAAGGTTT TAAAGGGGTC TTGGTAAGTG AGTTATTAGA TCCTGCGCTG
ATTGCCAATA TGTTTGAGTT TATCTCGGAA ACAGGCGCAA TGGAATTATT TGACCGGGTT
GATATTGAAG CGCTGCATCG GGCGCGTGAA TTTATGTTGA GCCAGTTGGC TATGGCTTTA
CACTCTGAAT TTGTTACTGT TTATCATGCA CGTCAAGTGG CGGGAGAATA TCTGGCCATC
ACCGCAGATA TCGCCGATCG TCAACTGGCT AACTTGGCAT TGTTATTTAT TGCCAAAGCG
GATCCGGCCT TAGGTAATGA ACTGGTGGTG AAACAAATTG CCCATTGCAA TAATATGACC
GATCATCTGG CAGGGTTAGT TGCGGCTAAT AGTGCTTCAC TTGCATGCCG GGAAACGGTT
ATGCAGGATT TTGAAGAGAA GTGGTTTGAA AATGGTTTAG TTATGGATAA ATGGTTTGTC
ATTCAGGCAA GCCAGGACCG GTCTGATGTA TTAGATAATG TAAAAGCATT ATTTAAGCAT
CGCAGTTTTG ATTTTAATAA TCCTAACCGA CTGCGCTCAC TAGTGGGCGC ATTCGCGCAA
AATAATCCTT ATCATTTTCA TGCTGAAGAT GGCAGTGGTT ATCACTTTTT AACTGAGCAG
TTGATAAAAT TAAACAAGCA GAACCCACAA GTGGCTGCGC GCTTAATAAC GCCGTTAATT
CAATTCAAAC GCTTGGATGA AAATCGTAAA AATTTAATTA AAAAACAGTT AAATCGTTTA
CTGCAGCTTG ATGATTTAGC CTTAGATTTA TATGAAAAAG TCAGCAAAGC ACTAAAGCAG
TAA
|
|---|
| Protein sequence | MSQVTSIENT VEKNSKEKYL SDYQVSNYEI DSIDLEFELY DTTTLVKAVS SVIRVGEHQQ
PLFLFGEQLQ LKKLLVNGVN HPDYKLVKGG LELSYLPQTF TLEIHTEINP QANTSFSGLY
KSGGAFCTQC EAEGFRRITY YLDRPDVMAK FTTKISADKD LYPFLLSNGN PVDQGDLDNG
RHWVSWSDPF PKPAYLFALV GGDFDCLKDT FTTKSGREVA LELFVDKGNL DKTAHAMISL
KKAMLWDEQR FNFEYDLDIY MIVAVDFFNM GAMENKGLNI FNSKFVLANA QSATDQDFLG
IEAVIGHEYF HNWTGNRITC RDWFQLSLKE GLTVFRDQEF SSDLGSRSVN RIANVKTMRN
HQFAEDAGPM SHPIRPASVM EMNNFYTLTV YEKGSEVIRM LHTLLGEKAF QQGMELYVAR
HDGQAVTCDD FIAAMQDASK IDLTLFKRWY SQSGTPNVHV SDHFDLSKNC YQMTFKQKTQ
PTADQKIKQA LHIPIAIELL DKQGNALKLA DNKTNTILSL THTEQTFVFQ NISEKPVPSL
FRGFSAPVKY QYAYSDLQLL HLMNFASDEF SRWDAGQTLF NKYLALNVQR LQDKQEMKLP
ALFIEGFKGV LVSELLDPAL IANMFEFISE TGAMELFDRV DIEALHRARE FMLSQLAMAL
HSEFVTVYHA RQVAGEYLAI TADIADRQLA NLALLFIAKA DPALGNELVV KQIAHCNNMT
DHLAGLVAAN SASLACRETV MQDFEEKWFE NGLVMDKWFV IQASQDRSDV LDNVKALFKH
RSFDFNNPNR LRSLVGAFAQ NNPYHFHAED GSGYHFLTEQ LIKLNKQNPQ VAARLITPLI
QFKRLDENRK NLIKKQLNRL LQLDDLALDL YEKVSKALKQ
|
|---|
| |