| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2283 |
|---|
| Symbol | rlmL |
|---|
| ID | 4626812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 2772555 |
|---|
| End bp | 2774804 |
|---|
| Gene Length | 2250 bp |
|---|
| Protein Length | 749 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639797424 |
|---|
| Product | 23S rRNA m(2)G2445 methyltransferase |
|---|
| Protein accession | YP_943623 |
|---|
| Protein GI | 119945943 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.402285 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAGTT ATTTTATCCC TACCGCTAAA GGGTTGGCCC CTCTGCTTGA AGTTGAGCTA
AAAGAGATGG GTATTGAAAA TCCGCAACAA ATGAATGGTG GCGTGAAATT CGAGGGCACC
TTAGAGCAAG GGTATAAAGT TTGTTTATGG TCTCGTTTTG CCAGCCGAGT ATTGTTAAAG
CTTTCTGAAT TCAAAGTGTT AGATTCAATG GATCTGTATT TAGGCTGCAG CAATATTCCC
TGGGAAACGC ATTTTGATGT TGATAAAACC TTCTCTATCG ATTTTTCCGG TACCAACGAT
GAAATTCGTA ATACTCAGTT TGGTGCGTTA AAAATTAAAG ATGCGATTGT GGATCGTTTC
CGTAAGCACT TTGATGAGCG TCCAAATGTT CAAAAACGTG ATGCTGATAT TCGTTTTAAC
GGCCGTTTAT GGAAAGACAA GGCGACTATT TATTTAGACC TGTCGGGTTC GCCGCTGCAC
CTTCGTGGTT ACCGTACTAT CGCAGGCGAA GCGCCACTGC GTGAGACCTT AGCTGCTGGT
ATTATTAAAC GCAGTGGTTG GCAGGGTGAA GCTCTTTTAG ACCCAATGTG TGGCTCAGGT
ACTTTGGTTA TAGAAGCGGC CATGATGGCG TTAAATATAG CGCCAGGCTC GTTGCGTGAA
ACCTTTGGTT TTGAAAAGTG GAAAAAACAC GATCAGGAAT GCTGGCAAAC GCTTAAAACA
TCGGCACAAG TTTATGGACG TCGCGCAGTC AATCAGTGTG AAACACGTTT TTACGGATCT
GATTTAAGCA AAGATATGAT TGAAATTGCC CGCAAAAATG CACAACGGGC AGGGGTTGGC
GAAGTAATTG AATTTTCTGT GACCGATGCT AAAAAAGTAC TACCACCCGA AGAACTTGAA
ACCGGAATGT TAATTACTAA CCCTCCCTAT GGTGAACGTC TAGGCAGTTT CAGCGATACC
ATCACACTTT ATACTGAGCT TGGTTATCAT TTTAAAGATG CCTTTGCCGG TTGGAATTTA
TCTATGTTTG CCATGGACAC TGAATTATTA AGTTGTTTAG GGATGCGTGC GGGTAAAAGT
TTTAAATTCT TTAATGGACC GATTGAGTGT GTGCTTAAGA ATTACCGTAT TTCGCCAAAA
CGTCCGGCCG TAGAAGTTGA ACCGGTAGCC CCGAAAAAGA CAAACAAAGA AACCCCTGAG
CCTATCAATC CCTGGACCAT GGGTCAAAAT GAAAGTGTTG TTGAAGCCGC AATCGAAAAT
GAGTCTGAGC TTGTTTTTAA AGAGGTTCAA CAAATAAAAC CCGCTATTTA TGCGGAAGAA
TTTGCTAACC GTTTACTTAA AAACCTAAAA CAACTGGAAA AATGGGCAAA ACGTGAAGGG
GTTGAATGTT ACCGTTTATA TGATGCCGAT TTACCTGAAT ATAACGTCGC TATTGACCGT
TATGCTGAAT ATATTATTAT TCAAGAATAC CGTGCTCCCA AAGAGATTGA GACACAAAAA
GTACGTCGCC GCTTCTTAGA TGTTGTTTCT ACAGTACGCT ACGTATTAAA TCTCCCCGAT
GACAAATTAG TTATTAAAGT ACGTGAACGT CAGAAAGGGC GTCAGCAATA TGAAAAATTG
GATACCAAAA AACAGTCATT AGTCGTCCAT GAAGGGCAGG CCAAAATGCT GGTTAATTTG
CAGGATTATT TGGATACTGG CCTGTTTTTA GATCATAGAC CAACCCGTTT ACTGATTGGC
AACATGGCTA AAGGCAAAGA TTTTTTAAAT CTATTTTGTT ATACGGCAAC GGCTTCTGTG
CATGCTGCAC TGGGTGGTGC TAAATCAACA ACCAGTGTTG ATATGTCTAA GACTTATCTC
GCCTGGGGCG AAGATAACTT TGCAGAAAAC GGCATTAAAG GTAAACATGA GTTTATTCAG
CAGGACTGTA TTAAATGGCT ACAGCATGCC CACGAGATGT ATGACCTTAT TTTTATTGAT
CCGCCAACCT TCTCAAATTC CAAACGTATG AATGATGTGT TTGACGTGCA GGAGGATCAT
GTTGCACTGT TAACCTCTGC CAGTCAGCGT TTAAATAAGC AGGGCGAAAT TATTTTCTCA
AATAATAAAC GTGGTTTTAA ATTAGATGTT GATGCTATTA AAGCATTAGG TTTTTATATT
AAAGATATCA GCCAGTCCTC CATACCGGAA GACTTTAGAC GCAATAAAAA AATTCATCAG
TGCTGGATTT TAACTAAGCA TACTGATTAA
|
|---|
| Protein sequence | MLSYFIPTAK GLAPLLEVEL KEMGIENPQQ MNGGVKFEGT LEQGYKVCLW SRFASRVLLK
LSEFKVLDSM DLYLGCSNIP WETHFDVDKT FSIDFSGTND EIRNTQFGAL KIKDAIVDRF
RKHFDERPNV QKRDADIRFN GRLWKDKATI YLDLSGSPLH LRGYRTIAGE APLRETLAAG
IIKRSGWQGE ALLDPMCGSG TLVIEAAMMA LNIAPGSLRE TFGFEKWKKH DQECWQTLKT
SAQVYGRRAV NQCETRFYGS DLSKDMIEIA RKNAQRAGVG EVIEFSVTDA KKVLPPEELE
TGMLITNPPY GERLGSFSDT ITLYTELGYH FKDAFAGWNL SMFAMDTELL SCLGMRAGKS
FKFFNGPIEC VLKNYRISPK RPAVEVEPVA PKKTNKETPE PINPWTMGQN ESVVEAAIEN
ESELVFKEVQ QIKPAIYAEE FANRLLKNLK QLEKWAKREG VECYRLYDAD LPEYNVAIDR
YAEYIIIQEY RAPKEIETQK VRRRFLDVVS TVRYVLNLPD DKLVIKVRER QKGRQQYEKL
DTKKQSLVVH EGQAKMLVNL QDYLDTGLFL DHRPTRLLIG NMAKGKDFLN LFCYTATASV
HAALGGAKST TSVDMSKTYL AWGEDNFAEN GIKGKHEFIQ QDCIKWLQHA HEMYDLIFID
PPTFSNSKRM NDVFDVQEDH VALLTSASQR LNKQGEIIFS NNKRGFKLDV DAIKALGFYI
KDISQSSIPE DFRRNKKIHQ CWILTKHTD
|
|---|
| |