Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2281 |
Symbol | |
ID | 4626810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2770376 |
End bp | 2772292 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639797422 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_943621 |
Protein GI | 119945941 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.962843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCATTAT TAACGTTACA CAACGCAGAG CTCGCCTTTG GTGAGCACCC ATTATTAAAT AAATCCAATC TGGTTATTGA ACCTAATGAA CGAGTTTGTT TGGTCGGGCG TAATGGCGCA GGTAAATCAA CCCTGTTAAA AGTATTAGAC GGTCGTATTC AACTTGAAGA TGGCACTTTA TTGATCAATA CCGATGTCAA AGTGGCACGT TTAGAACAGG ATCCACCCAC AGCGAATACC CTGAGTGCTT ATGATTTTGT GGCTTCCGGC ATGGAAAATG CGGGTGAAAT ATTAAAAGCA TATCATCACC AACTTCATGT TATCGCAGAA GACTGCAGTG AAAAGCAGTT AAATAAACTG CAAAGACTGC AGGAGCAAAT CGATCAGCTG GATGCCTGGC AGTTAGACAG TAAAATCAAT CAAATATTAG ATCGTTTAGG AATCGACCCC GAGGCAACGC TGGATCAGTT ATCCGGTGGA TGGTTACGCA AAGTCGCTTT AGCAAAAGCA TTAGTGAATG ATCCAGACCT GTTGTTGCTT GATGAGCCTA CCAATCACCT CGACGTCGGT ACTATCGAGT GGTTAGAAGA CTTTTTATTC AGTTTTCAAG GTGCGATTAT CTTTATCAGC CACGATAGGG AATTTATTCG CCGTTTATCA ACACGTATAA TTGATATTGA CCGTGGTAAT TTAAGCTCCT GGCCGGGTGG TTACGATGAG TATTTGATTG CTAAAGAAGA AGCATTACGC GTCGAAGAAG AGCAGAATTC TGAATTCGAT CGTAAATTGG CGATTGAAGA AAAGTGGATT CGCCAGGGTA TCAAAGCCCG TCGTACACGT AATGAAGGCC GTGTTCGAGT GCTTAAATCA TTACGTAATG AACGCGCAGA TCGTCAAAAT GTGCAGGGCA AAGCGAAAAT TAATATTGAC GCCGGCACGC GCTCCGGGAA AATCATTTTC GAAGCCGAGC ATGTTGCTTA CAGTTATGAT GAGCTATGCA TAGTACGTGA TTTTTCCTGC GCTATTATGC GCGGAGATAA AATTGCATTA GTCGGTCGAA ATGGCTGCGG CAAGAGTACC CTGTTAAAAT TATTACTGAA CCAATTACAG CCCGATGCAG GTGAAATCAA GTGCGGTACT AAGCTTGATG TTGCCTACTT TGACCAATAC CGGGGTGAAT TAAATCCTGA AAAATCGGTA ATGGATAACC TTGCTGAAGG TAAGCAGGAA GTGGAAGTGA ATGGCATTAA ACGCCATGTT TTAGGTTATT TACAAGACTT CTTGTTCCAT CCGGAACGCG CTCGTACACC CGTTAAAGCG TTATCCGGTG GTGAAAAAAA CCGTCTGTTA CTGGCTAAAA TATTTTTAAA ACCCAGTAAC TTATTAATTC TTGATGAACC TACCAATGAT CTCGATGTTG AAACGCTGGA GTTATTAGAA GAGCTGTTAG CCAATTATAA GGGCACTTTA TTATTGGTGA GCCATGACCG TAGTTTTGTT GATAATACAG TGACTAATAC CTGGTTCTTT GATGGCAATG GTAACGTAAA ACAGTTCGTC GGTGGTTATA GTGACGCTAT GCGCCATAAA ACCCAAAGTG AAGCACCCGC TCAGCCTGTG ATTAGCGACG TTAAAGCGGC TGCTAAAAAA GACAAAGCCC CTGTAAAAGC AGCTGCCAAG AAAAAATTAT CCTATAAATT ACAACTTGAA CTGGATAATT CACCGCGTTT ACTTGAAGAG CTGGAAGAAA AAGTAGAAAG TTTACAGGCA ACCATTAATA CGCCTGAATT TTTTAACAAA GATAAAACCG AAGCGGATGC CTTCTTAGCA CAACTTGCCC AGGCCGAAGA GCAGCTTGAA ACAACCTTTA TGCGCTGGGA AGAGTTAGAA GAATTGCAAA ATGGAGAAAA CAGCTAA
|
Protein sequence | MALLTLHNAE LAFGEHPLLN KSNLVIEPNE RVCLVGRNGA GKSTLLKVLD GRIQLEDGTL LINTDVKVAR LEQDPPTANT LSAYDFVASG MENAGEILKA YHHQLHVIAE DCSEKQLNKL QRLQEQIDQL DAWQLDSKIN QILDRLGIDP EATLDQLSGG WLRKVALAKA LVNDPDLLLL DEPTNHLDVG TIEWLEDFLF SFQGAIIFIS HDREFIRRLS TRIIDIDRGN LSSWPGGYDE YLIAKEEALR VEEEQNSEFD RKLAIEEKWI RQGIKARRTR NEGRVRVLKS LRNERADRQN VQGKAKINID AGTRSGKIIF EAEHVAYSYD ELCIVRDFSC AIMRGDKIAL VGRNGCGKST LLKLLLNQLQ PDAGEIKCGT KLDVAYFDQY RGELNPEKSV MDNLAEGKQE VEVNGIKRHV LGYLQDFLFH PERARTPVKA LSGGEKNRLL LAKIFLKPSN LLILDEPTND LDVETLELLE ELLANYKGTL LLVSHDRSFV DNTVTNTWFF DGNGNVKQFV GGYSDAMRHK TQSEAPAQPV ISDVKAAAKK DKAPVKAAAK KKLSYKLQLE LDNSPRLLEE LEEKVESLQA TINTPEFFNK DKTEADAFLA QLAQAEEQLE TTFMRWEELE ELQNGENS
|
| |