Gene Ping_2253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2253 
SymbolsucA 
ID4623463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2739655 
End bp2740368 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content38% 
IMG OID639797393 
Productsuccinate dehydrogenase catalytic subunit 
Protein accessionYP_943593 
Protein GI119945913 
COG category[C] Energy production and conversion 
COG ID[COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 
TIGRFAM ID[TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.718779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.708681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTGA AATTTTCTAT TTATCGTTAT AACCCTGATG TTGATAACGC GCCCTATATG 
CAAGATATGT CTTTAGATAT TGCAGAGGGC TCTGATATGA TGGTGCTTGA TGCTTTAATG
ACTCTGAAAG AGAAGGATCC TACCTTATCT TTTCGTCGTT CATGTCGGGA AGGCGTTTGT
GGTTCCGATG GTATGAATAT GAATGGTAAA AATGGCTTAG CCTGTATCAC TCCATTGTCG
GATTTATTGT CGAAAGGTAA AGTAATATTA CGTCCATTAC CGGGATTACC CGTAATACGT
GATTTAGTCA TAGACATGAC CCAATTTTAT ACTCAATATG AAAAAATCAA ACCCTACTTG
ATTCCTGATG ATCGTCAACC ACCCGTTGGA GAGTACAAAC AAACACCAGA AGAGAGAGAA
AAACTCGATG GTTTATATGA ATGTATTTTA TGTGCTTGTT GTTCAAGTTC TTGTCCTTCT
TTTTGGTGGA ATCCAGATAA ATTTATTGGT CCTGCCGGTT TATTAGCGGC CTACCGTTTC
CTTATCGACA GTCGTGATAA TGCAACAGAA GAGCGACTTG CAGACTTAGA TGATGCATTC
AGTGTATTCC GTTGTCATAA TATTATGAAT TGTGTCAGTG TTTGTCCCAA AGGATTAAAC
CCGACAAAAG CAATAGGAAA AATCAAATCA ATGTTATTAC AACGTGCTAT TTAA
 
Protein sequence
MQVKFSIYRY NPDVDNAPYM QDMSLDIAEG SDMMVLDALM TLKEKDPTLS FRRSCREGVC 
GSDGMNMNGK NGLACITPLS DLLSKGKVIL RPLPGLPVIR DLVIDMTQFY TQYEKIKPYL
IPDDRQPPVG EYKQTPEERE KLDGLYECIL CACCSSSCPS FWWNPDKFIG PAGLLAAYRF
LIDSRDNATE ERLADLDDAF SVFRCHNIMN CVSVCPKGLN PTKAIGKIKS MLLQRAI