Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2214 |
Symbol | |
ID | 4623851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2696726 |
End bp | 2697850 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639797352 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_943554 |
Protein GI | 119945874 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00238944 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.155586 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAATATA AATTAATTAA TACTGATGGG CGTGCGCGTC GGGGCCGTTT GACCTTTGAT CGTGGCAGCG TTGAAACTCC CGCATTTATG CCTGTGGGTA CTTACGGTAC AGTAAAAGGA ATGACGCCCG AAGAGGTTGA TGCAACCGGC GCAGAAATTT TATTGGGAAA TACCTTTCAC TTGTGGTTAC GCCCCGGTCA GAAAGTCATC AAAGCACACG GTGATTTGCA TGATTTTATG AATTGGAAGG GCCCCATTTT AACAGATTCA GGCGGCTTTC AAGTATTTAG CTTAGGTAAA ATGCGCAAGA TAAAAGAAGA GGGGGTTTAT TTTCGTAGCC CTATTAATGG TAGTGAGGTA TTTTTATCAC CTGAAATATC GATGGATATA CAGTACGATT TAGGATCTGA CATTGTGATG ATCTTTGATG AATGTACTCC TTATCCGGCG ACAGAAGAAG AAACGGATGT TTCGATGCAA CTTTCCCTAC GCTGGGCGCA GCGCAGTCGG GATCGTTTTG ATGAACAACA AAATCCGAAT GCTTTATTTG GTATTATTCA GGGGGGGTGT TTCGAGCAAT TTCGCGATAT TTCTTTAGAT GGATTAACCA ATATAGGTTT TGATGGTTAT GCGATTGGTG GCCTTGCAGT GGGTGAGCCG AAAGAAGATA TGTACCGCAT CTTAGAATAT ATCGCGCCTA AAATCCCTGA GGATAAACCC CGTTATTTAA TGGGGGTTGG CAAACCTGAA GATTTAGTTG AAGGCGTGCG TCGCGGTATT GATATGTTTG ATTGTGTTAT GCCGACTCGC AATGCGCGTA ATGGGCATTT ATTCACAACG GATGGTGTGA TAAAAATTCG TAACGCTAAA CACCGTGAAG ATGCAACTAC TTTAGATTCC GAATGTGATT GTTACACCTG TAAAAACTAT ACGCGTGCAT ATCTATATCA TCTTGATAAA TGTGGAGAAA TACTGGGTGC GCGATTAAAC ACTATCCATA ACTTAAGTTA CTATCAACGT TTAATGAAAG GTTTGCGTGA AGCCATTGAA CAGGGTAAAT TAGAAGACTT TGTTGATACG TTTTATCAAC GCATCGGAAA AGAAAAACCG ATGCTGGACG TTTAA
|
Protein sequence | MEYKLINTDG RARRGRLTFD RGSVETPAFM PVGTYGTVKG MTPEEVDATG AEILLGNTFH LWLRPGQKVI KAHGDLHDFM NWKGPILTDS GGFQVFSLGK MRKIKEEGVY FRSPINGSEV FLSPEISMDI QYDLGSDIVM IFDECTPYPA TEEETDVSMQ LSLRWAQRSR DRFDEQQNPN ALFGIIQGGC FEQFRDISLD GLTNIGFDGY AIGGLAVGEP KEDMYRILEY IAPKIPEDKP RYLMGVGKPE DLVEGVRRGI DMFDCVMPTR NARNGHLFTT DGVIKIRNAK HREDATTLDS ECDCYTCKNY TRAYLYHLDK CGEILGARLN TIHNLSYYQR LMKGLREAIE QGKLEDFVDT FYQRIGKEKP MLDV
|
| |