Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2150 |
Symbol | |
ID | 4625936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2622012 |
End bp | 2623004 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639797290 |
Product | diguanylate cyclase |
Protein accession | YP_943492 |
Protein GI | 119945812 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGTTAT CTTCCCTGGA AAAACATATT CAAGAGTTAA ACCGTTATCT TAATTTCCAC AAGGTTTGCT GGTGGATTAT GGATATTGAA AATGAGCCCG ATCTCTTTTA TTGCAATCAG TATATGGAGG ATGTCTTTAA CCTTGATAAA TCTTTACCCT ACCACTCTGT TTCTAATACT TGCCCTATCG CGGGTGATTA TCTTAAAAAT GTTGAGCTAA AATCATCTCA GCAGGCGAAA TTAATATTGG CTGAATATCA GGATTTACTC AATCAAAAAA CCGCAGAGTA CAAAAATCAA TTTCCCTATT TTGATCCAAG AACAAATATC ACTCATTACT TTACAAGCAG GGCTAAGATA CTTGAGCTTA ACGATCAAGG AGAGGTCGCC ATAATTTATG GCATTATTGA AGATACCACC GCAATAGTAC GCCAGTATCG AAGGATAAAA AAACAACATA AGATGTTCAA AGAATTAAGT GAAACTGATC CATTAACGGG GTTAGGCAAC AAACGTTTTT TTATGAAATT ACTTGGGTTC AGCTTTGATA AAGCGCAACG AGAGCAGACT GAGCTAGCAG TATTAATGAT AGATATCGAC TATTTTAAGT TATATAACGA CTATTATGGT CACCTGAAGG GTGATCAGTG CTTAAAGCAG GTGGCTAATG CGATTAAAAA CTCCTTATCC AGGAAAACGG ACATTGTCGC AAGATTTGGC GGAGAGGAAT TTATTATCTT TTTTACGGGG GCGAGTGCGC AGCAGACATT ACAGTTAGCC GAGTTGATAA AAAATAATGT TGAGTTATGT CAAATTACTC ATCCAAAATC ACCTGTCTCT GATTATGTTA CAGTGAGTAT CGGCGCTTAT ATAAAAATTC CATCGATCGA AAATTATGCA GCAGAAACAT TTATTAAATA TGCTGATAAA AATTTATATA AGGCGAAATC ATTAGGACGT AACAAAACCG TTATTAATGA ATCAAGTCTG TAA
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Protein sequence | MRLSSLEKHI QELNRYLNFH KVCWWIMDIE NEPDLFYCNQ YMEDVFNLDK SLPYHSVSNT CPIAGDYLKN VELKSSQQAK LILAEYQDLL NQKTAEYKNQ FPYFDPRTNI THYFTSRAKI LELNDQGEVA IIYGIIEDTT AIVRQYRRIK KQHKMFKELS ETDPLTGLGN KRFFMKLLGF SFDKAQREQT ELAVLMIDID YFKLYNDYYG HLKGDQCLKQ VANAIKNSLS RKTDIVARFG GEEFIIFFTG ASAQQTLQLA ELIKNNVELC QITHPKSPVS DYVTVSIGAY IKIPSIENYA AETFIKYADK NLYKAKSLGR NKTVINESSL
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