| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2117 |
|---|
| Symbol | |
|---|
| ID | 4626696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 2576404 |
|---|
| End bp | 2577450 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639797259 |
|---|
| Product | proline racemase |
|---|
| Protein accession | YP_943461 |
|---|
| Protein GI | 119945781 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3938] Proline racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.231531 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTCGA GTAAGTTAGT TCATGTAGTC TCATGCCACG CAGAAGGTGA AGTGGGTGAC
GTCATTGTTG GTGGTGTAAA TCCGCCGCCA GGTGATACTC TGTGGGAGCA AAGAGAGTGG
ATACATAAAG ACAATGAGTT ACGAAACTTT GTTCTGAATG AGCCTAGGGG CGGAGTATTT
CGTCACGTTA ATTTACTTCT CCCCTCCAAG CACCCTGACG CTAGCTATGC GTGGATTATA
ATGGAACCAG AAGATACTCC CCCTATGTCA GGTTCAAATA GTATTTGTGT CTCAACTGTA
CTGCTTGATA CAGGACTTGT TCCTATGGTG GAGCCTATTA CCGAAATGAC CTTAGAAGCG
CCAGGCGGAT TAGTTAAGGT ACGCGCTGAA TGTGATAATG GAAAAGCAAG GCGTATTTTT
GTTGAAAACG TTCCGTCTTT TGCCTGTGCA TTAGACCAAG CGTTATTTGT TGAAGGTATC
GGTAAATTGA CGGTAGATAT AGCTTATGGT GGAGACAGCT TTGTCGTTGT TGATCCTAAA
GAATTAGGAA TAGAACTTAC CGCTAGCAAT GCTGGAAAAA TTGCAAAAAT TGGTACTAAA
ATTACAGACG CCGCCAATGC ATCATTAAAA TTTTATCATC CAGAAAAAGA CTGGAAGCAT
TTTTCATTCT GTTTGTTTGC AGGAGAACTA GAAAAAACCG AAACAGGGTT TCAGGCTTTA
TCTGCGGTGG TTATTAAACC AGGTAAAGTT GACCGTTGTC CGACAGGTAC ATCGGTTAGT
GCTCGCATGG CTATTCTTCA TGCTAGAGGG GTAATGAAGG TGGGAGATAC ACTCTTAGCT
GTTTCAGTCA TTGGCTCTAC CTTTAATGGG AAGATACTGC GCACTTGCCA GGTGGGTGAT
TTGGAGGCTA TTGTTCCCGA AATATCAGGA AGGGGATGGA TTACCGGCAC GCATCAGCAC
ATGTTAGATC CCGATGACCC ATGGCCACAA GGTTACCGAC TCAGTGATAC TTGGCCAATG
AACGAACAAG ATAAAGGTAA TAACTAA
|
|---|
| Protein sequence | MRSSKLVHVV SCHAEGEVGD VIVGGVNPPP GDTLWEQREW IHKDNELRNF VLNEPRGGVF
RHVNLLLPSK HPDASYAWII MEPEDTPPMS GSNSICVSTV LLDTGLVPMV EPITEMTLEA
PGGLVKVRAE CDNGKARRIF VENVPSFACA LDQALFVEGI GKLTVDIAYG GDSFVVVDPK
ELGIELTASN AGKIAKIGTK ITDAANASLK FYHPEKDWKH FSFCLFAGEL EKTETGFQAL
SAVVIKPGKV DRCPTGTSVS ARMAILHARG VMKVGDTLLA VSVIGSTFNG KILRTCQVGD
LEAIVPEISG RGWITGTHQH MLDPDDPWPQ GYRLSDTWPM NEQDKGNN
|
|---|
| |