Gene Ping_2097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2097 
Symbol 
ID4627019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2552674 
End bp2553480 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content45% 
IMG OID639797242 
ProductHAD family hydrolase 
Protein accessionYP_943444 
Protein GI119945764 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.978592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.811139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAC CCTTAGCCGA CATGTCGGTC ACTCAAGCAA GCGCGATTAA ATGGTTATTA 
ACTGACGTTG ACGATACCCT AACCTGGCAG GGAAAGCTGC CACCCGAAAC CCTCATTGCA
CTGGAGAAAC TCACTGCTGT TGGCATAAAT GTTGTGGCAA TAACCGGGGC GTCTGCCGGC
TGGTGCGATC AAATAGCAAG ACTCTGGCCT GTTCATGGCG TGATTGGTGA AAATGGGGCT
TTTTGGATGC AGAAAAACGC GACTGGTTTT ATCACCAGAG AAAGCATTCC AATCGATACC
ATGAAGTCTC AGCAAATGGC GCTTATCAAG CATCTTCGAC TATTGCTTGA GGACTATCCC
GATATCGATT TTGCATGCGA TCAGTCTTTT CGCTACTGTG ATGTCGCCAT TAACTTAAGC
CAGGATCGCC CCCCTGTTGA TCAGAAAATC TGTGATGAAC TGCTGATAAA AGTTCGTAAT
TTGACCGTCG ACGGGCAATC CGTCAATGCG ACGTTAAGCT CAATTCATCT TAATGTCTGG
ATAGGCAATC ACAATAAGCG CTTATCCGCC GAGCAATATT TATTTGCTCA CAATGTCCAG
ATGAATTTCA ATGAGATAGC CTATATCGGT GATTCATTAA ATGATGAAGC CATGTTTGCA
TGGCTGCCGT TGACCTTTGG AGTGAAAAAT ATTGAACGGC TGTTACCTCA GTTTGAAACT
AAGCCTGCTT ATATTACCAA TAAAAATGGG GGCTACGGCT TTGCCGAGCT GGCTGATTTT
ATTTTACAGG CAAAAGAGAG TCGCTAG
 
Protein sequence
MPKPLADMSV TQASAIKWLL TDVDDTLTWQ GKLPPETLIA LEKLTAVGIN VVAITGASAG 
WCDQIARLWP VHGVIGENGA FWMQKNATGF ITRESIPIDT MKSQQMALIK HLRLLLEDYP
DIDFACDQSF RYCDVAINLS QDRPPVDQKI CDELLIKVRN LTVDGQSVNA TLSSIHLNVW
IGNHNKRLSA EQYLFAHNVQ MNFNEIAYIG DSLNDEAMFA WLPLTFGVKN IERLLPQFET
KPAYITNKNG GYGFAELADF ILQAKESR