Gene Ping_2093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2093 
Symbol 
ID4627015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2548420 
End bp2549727 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content43% 
IMG OID639797238 
Productglycerol-3-phosphate ABC transporter extracellular solute-binding family 1 protein 
Protein accessionYP_943440 
Protein GI119945760 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.107678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.487826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTA AAAACCTCAC TGGGTTGGCG GTAGCGGCAA CGTTATTGAG TGCGCAAGTT 
CATGCTAAAA CAGAGGTTGA ATGGTGGCAT GCAATGGGTG GAAATTTAGG CCAAAAAGTA
AATGAAATTG CGGCTGATTT TAATAAAAGT CAATCCGAAT ATGAAATCAA ACCCGTTTAT
AAAGGCAGCT ACGCTGAGAC AATGACCAGT GCTATCGCCG CATTTCGAGC GCAGCAGCAA
CCCGCTATTG TGCAAGTCTT TGAAGTAGGT ACCGCGACTA TGATGGGGGC AGAGCAGGCT
ATTTATCCCA TTCATGAATT GATGAAAGAG ACTAATGAGT CTTTTAATCC CAATAATTAT
TTATCCGCAG TGACCGGCTA TTACACCACC AATGACGGAA AAATGTTGTC CATGCCGTTT
AATAGTTCGA CCCCTGTTCT GTATTACAAC AAAGCAATGT TTAAAAAAGC AGGTATAAAA
TCAGCACCCA AAACATGGCA AGAGATGGAA GATGTCTCTG TTAAGTTATT AGCCTCCGGT
GCCCAATGCG GTTTTAGCAC CACATGGCAG TCCTGGACAC AAATCGAAAA CTTTGGTGCC
CGCAACAATA TTGCGCTTGC GGATAACAGC AATGGATTTG ATGGTTTAGA CACTAAGTTT
AAATTCAATA GCGCACCTTT TGTTGATCAT ATAGCACAAA TGGCTGAGTG GTCAAAATCT
GGAATCTTTA AATACGGTGG CCGTCAATCA AAAGGTATGC CGTTGTTTTA CACGCAGGAA
TGTGCAATGA CCATGGGCTC ATCTGCAGGG CTTGCCGGTA TTCAAGAAAA TATGAAAGAT
ATTGACGTGG GTGTTGCCGA GCTTCCTTTT GATGACACGC TTATTTCAAC ACCACAAAAC
ACTATTATTG GCGGCGCTTC ATTATGGGTG TTACGTGGAC ATTCAGACGA GCAATATAAA
GGAGTGGCTG AATTCTTTAC TTACCTGTCA AGTCCGAAGG TGCAAGCAGA TTGGCATCAG
TTTACCGGAT ATTTACCTAT TACTAAACAG GCGCACGCGC TAACGAAAAA GCAGGGATTC
TATAAAACGC ATCCTGGTAC TGAGACAGCC GTTATTCAAA TGACGTCAAC CAAGCCTACC
GTTAATTCCA AGGGAATTCG TTTTGGCAAC TTTCTGCAAA CACGTGACAT TATCAACGAA
GAGTTAGAAT CAGTCTGGTC TGGCGATCAA TCGGCTCAAG TCGCACTGAA TAATGCTGTG
CGTCTTGGTA ATGAGCAGTT GAGACGCTTC GAACGTACTC AACAGTAG
 
Protein sequence
MSIKNLTGLA VAATLLSAQV HAKTEVEWWH AMGGNLGQKV NEIAADFNKS QSEYEIKPVY 
KGSYAETMTS AIAAFRAQQQ PAIVQVFEVG TATMMGAEQA IYPIHELMKE TNESFNPNNY
LSAVTGYYTT NDGKMLSMPF NSSTPVLYYN KAMFKKAGIK SAPKTWQEME DVSVKLLASG
AQCGFSTTWQ SWTQIENFGA RNNIALADNS NGFDGLDTKF KFNSAPFVDH IAQMAEWSKS
GIFKYGGRQS KGMPLFYTQE CAMTMGSSAG LAGIQENMKD IDVGVAELPF DDTLISTPQN
TIIGGASLWV LRGHSDEQYK GVAEFFTYLS SPKVQADWHQ FTGYLPITKQ AHALTKKQGF
YKTHPGTETA VIQMTSTKPT VNSKGIRFGN FLQTRDIINE ELESVWSGDQ SAQVALNNAV
RLGNEQLRRF ERTQQ