| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2049 |
|---|
| Symbol | |
|---|
| ID | 4624688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 2494489 |
|---|
| End bp | 2495619 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639797201 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase |
|---|
| Protein accession | YP_943403 |
|---|
| Protein GI | 119945723 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
|---|
| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0684431 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.112207 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATCG CCATTGTCGG TTGTGGCCAG CTCTCTCGTA TGATGGCCCT CGCGGGGCTG
CCTCTGGGCA TTCAATTTAG CTTTATTCAC GATGATAAAA GCCAAAACAG AGACTGTGTA
CAAGGCTTAG GCATCATAGA ATATTCGCCT GACAAAATAA AAAGCACAAA CAGCTATGAC
ACTAAAGCCA TCGCACAACT TTACCAAGCT CTAGGTCAAC CTGATTGTAT TAGCGTTGAA
AAAGAGCAAG TTGACCTTGC TTTATTACAA GCATTAGCTG ATTTTTGTCC TATTTATCCG
TGTGTTGCAG CGATAAAAGC TTGCCAACAC CGAGGTGAAG AAAAACAGTT ATTAACTGAC
TTAGCTATTC CAACTTCTCC TTATTTTTAT AATAACGGTG CTAAGCAAGC GGTTCAGACT
TTAGGTTATC CCGTTATGGC CAAATCATGC ACCGAAGGCT ACGACGGCAA AAACCAATGG
CTGATTAAAA CCCCTTCTGA TGCAGTGCAG TTTGATAAGT TACAAATTGA AGATTATATC
ATTGAAAAGT TTATCGAATT TGATAAAGAG ATATCACTTA TCTCAGTGCG CAGCCAAAGT
GGCCAAATCA AGCACTACTC TCTCACCGAG AATCATCATC AGCAGGGAAT GTTAACACAC
TCAATCGCGC CCGCTCTTAA TATTCCTGAC TCTGTAAAGC TGCAGGCACA ACATTATATG
GAAAGCCTGC TCAACCAATT AGAGTATGTC GGCATACTGG CCATCGAGTT TTTTGTGGTT
GGCGATAGCC TGATGGTTAA CGAACTGGCT CCTCGCGTTC ACAACAGTGG GCACTGGACT
CAATTAGGCA GTATTACTTG CCAGTTTGAA AATCACATTA GGGCCTTAGC TGGACTTAAT
CTAGGCAGTA CAGAACAGAT AGCGGTGACT GGCATGTTCA ACCTTATCGG CACCAAGCAG
CCCCCCTTTG ATGCATTAAC CCAAAACAGC AAACTATATT GGTATAACAA AGCGCCTAAA
GCAAAAAGGA AATTAGGGCA CATTAATTTT ATTGCTGAAA ATCAACAATT GGTTAAACAA
CAGATGATCC AACTAGCTGA TGCTAATCTA TCACTGACTG TTCATCATTA A
|
|---|
| Protein sequence | MRIAIVGCGQ LSRMMALAGL PLGIQFSFIH DDKSQNRDCV QGLGIIEYSP DKIKSTNSYD
TKAIAQLYQA LGQPDCISVE KEQVDLALLQ ALADFCPIYP CVAAIKACQH RGEEKQLLTD
LAIPTSPYFY NNGAKQAVQT LGYPVMAKSC TEGYDGKNQW LIKTPSDAVQ FDKLQIEDYI
IEKFIEFDKE ISLISVRSQS GQIKHYSLTE NHHQQGMLTH SIAPALNIPD SVKLQAQHYM
ESLLNQLEYV GILAIEFFVV GDSLMVNELA PRVHNSGHWT QLGSITCQFE NHIRALAGLN
LGSTEQIAVT GMFNLIGTKQ PPFDALTQNS KLYWYNKAPK AKRKLGHINF IAENQQLVKQ
QMIQLADANL SLTVHH
|
|---|
| |