Gene Ping_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2011 
Symbol 
ID4627217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2446496 
End bp2447581 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content44% 
IMG OID639797172 
ProductABC transporter ATP-binding protein 
Protein accessionYP_943374 
Protein GI119945694 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0583753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACA TTACACTTAA GAAGGTCATT AAACGTTTTG ACGATGTGCA AACTATCCAT 
GGTATTGATT TAGAAATAAG TCATGGTGAA TTTGTGGTCT TTGTTGGACC CTCTGGTTGC
GGTAAATCAA CCTTACTGCG ACTGATCGCC GGCCTTGAAG ATATTACAGA AGGTGAAATT
TATATTGGCG GCAAACTGGT CAACGATATT GATCCCGCTG AGCGTGGTGT CGCCATGGTA
TTCCAATCCT ATGCCCTTTA CCCGCATATG ACGGTTGAAG AAAATATGGG CTTCGGCTTA
AAAATGAACG GCCACACTAA AGAAACAATT TCTAAACAAG TCAACCTTGC GGCAAAGACA
TTACAGCTTG ATGCACACCT TAAACGTAAA CCAAAAGAGC TTTCCGGGGG ACAGCGTCAA
CGTGTCGCCA TTGGCCGTGC TATTGTTCGA GATCCTAAGG TATTCCTGTT TGATGAACCA
CTGTCTAACC TGGATGCTGA ACTTCGTGTG GAAATGCGTT TGCAGATAGC CAAACTTCAC
CAAGAGCTGA AAAACACCAT GGTTTACGTG ACCCATGATC AAGTGGAAGC AATGACACTG
GCAGACAAAA TTGTGGTACT GCGTGAAGGT CGCATCGAAC AAGTAGGCTC GCCATTACAG
CTTTATCATA AACCAGTAAA CGAATTTGTT GCAGGGTTTA TCGGTTCTCC GAAGATGAAC
TTTATTCCAA CAACGGTCAC AGCCACATCT GATGATAGCA TCACCTTGAC CACCCCGGAT
AATCAGAAAT TAATTATTCC TACACCGAAA ACAGGTATAA ATATTGGTGA TCCCCTGACC
TTTGGTATTC GACCTGAGCA TCTGCTTATT CATGGGGAAG CCGAAATTAA GCTAACATTC
AACAGTGAAG TCGTTGAGCG TTTGGGTAAC AGCACCTATA TGTATGGCCA ATCTTCAGGC
GTTGATGTCT TTACCGTGCA CCTTCCTGGC GATCAAGAAG TTAAAAAATT CCAAACGCTG
CAACTTAGCT GTACGAGCGA CAATATTCAT CTGTTTGACG GGAAAGGTAT CTGTATCACG
AGCTAA
 
Protein sequence
MEDITLKKVI KRFDDVQTIH GIDLEISHGE FVVFVGPSGC GKSTLLRLIA GLEDITEGEI 
YIGGKLVNDI DPAERGVAMV FQSYALYPHM TVEENMGFGL KMNGHTKETI SKQVNLAAKT
LQLDAHLKRK PKELSGGQRQ RVAIGRAIVR DPKVFLFDEP LSNLDAELRV EMRLQIAKLH
QELKNTMVYV THDQVEAMTL ADKIVVLREG RIEQVGSPLQ LYHKPVNEFV AGFIGSPKMN
FIPTTVTATS DDSITLTTPD NQKLIIPTPK TGINIGDPLT FGIRPEHLLI HGEAEIKLTF
NSEVVERLGN STYMYGQSSG VDVFTVHLPG DQEVKKFQTL QLSCTSDNIH LFDGKGICIT
S