Gene Ping_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1998 
Symbol 
ID4627204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2429632 
End bp2430513 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content41% 
IMG OID639797160 
Productalpha/beta hydrolase fold 
Protein accessionYP_943362 
Protein GI119945682 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.918963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.449099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTAG ATACTTTATT TCCTTTTAAA CGCAATTATT TAGATCGTAA TGGTCAGCAG 
TACCATTACC TAAATGAAGG TTCAGGTGAG CCGGTTGTGA TGGTACACGG TAACCCGAGT
TGGTCTTTTT ATTACCGCAA CTTAGTCAAA TCATTAAGCC GCAATTACCA ATGTGTTGTA
CCTGATCATA TTGGTTGCGG ATTATCCGAT AAACCCGCGG ATAAAGATTA TCAATACACA
CTCAAAAATC GCATCGATGA TTTAGAGGCA TTATTGGATT CGCTTAACAT CAATGAAAAT
ATTACCTTGG TTGTCCATGA TTGGGGCGGC ATGATAGGCA TGGGTTACGC GGCGCGACAT
CCAGAACGTA TTAAACGTTT AGTTATTTTA AATACCGCGG CTTTTCATCT GCCCAGCACT
AAATCGTTTC CTGTTCCATT ATTGATTGGT CGAAATACCT ACATTGGAAC CGTTTTAATA
CGCGGATTAA ATGCCTTTTC AGCGATAGCA TCCTATGTGG GCGTAAAACG CAAACCCATG
GAAAAAGCGG TTCGACAAGC TTATGTCGCA CCCTTTAATT CATGGAAAAA CCGCATTTCC
ACGCTCAGAT TCGTACAAGA TATCCCGCTT TTACCGCATC ATAAAAATTA CCAGTTAGTC
TCGGATATCA GCGACAGCTT GATTCACTTT CAGAAAATAC CCACCATCAT CTGCTGGGGA
ATGAAAGATT TTGTGTTCGA TAAACATTTC CTGAATACCT GGAAAGAAAA AATGCCCCAT
GCTGTGGTTC ATGAGTTTGA CGATTGTGGT CATTATATTC TGGAAGATGC CAGTGAACAG
GTGATCCCGC TTATTGAAAC ATTTATGGCA GAAAACCCTT AA
 
Protein sequence
MNLDTLFPFK RNYLDRNGQQ YHYLNEGSGE PVVMVHGNPS WSFYYRNLVK SLSRNYQCVV 
PDHIGCGLSD KPADKDYQYT LKNRIDDLEA LLDSLNINEN ITLVVHDWGG MIGMGYAARH
PERIKRLVIL NTAAFHLPST KSFPVPLLIG RNTYIGTVLI RGLNAFSAIA SYVGVKRKPM
EKAVRQAYVA PFNSWKNRIS TLRFVQDIPL LPHHKNYQLV SDISDSLIHF QKIPTIICWG
MKDFVFDKHF LNTWKEKMPH AVVHEFDDCG HYILEDASEQ VIPLIETFMA ENP