| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1988 |
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| Symbol | |
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| ID | 4627232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 2419079 |
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| End bp | 2420050 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639797153 |
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| Product | Tfp pilus assembly protein FimV-like protein |
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| Protein accession | YP_943355 |
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| Protein GI | 119945675 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | [TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.686168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.436452 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCGCT TGTTATTAAT TTTCACCTGT TGCTCCCCCT TAGTATTATT TCCTGCTATC
AGTTTTGCAC TTGATTCAAC CATTAGTACA GCGCAAGAAA TGCCGTCTTA TAAAAAATAT
GGCCCAATTC GTTATAATGA GTCTCTCTGG TCAGTCTCAA CAAAATTACG GCCAAATAGT
TCCGTCAGTA TTCAACAGAC ACTCCTGGCC ATTTACAAAT TAAATCCCGA TGCTTTTGTT
GCCGCAGATA TAAATAATTT TATTGAAGAC GCGATGATTA ATGTGCCAAC TTACACCTTT
ATAAAAAAAC AAAGTCATCA AGACGCAATT AACTTAATTA ACAACTTTTC AGGTAAGAGT
AAAACAGCAA CGAAATCAGT CGCTATTGCC AAAAGCAAAA AGGTTATTAT CATAAAGTCA
CCCTCTCTTT CTAAACAGGC AACAGTAACA ATTGTCGATA CGGGTGATCA ATCATTAACG
GCTTCGTTAA TCGATAAAAA ACATTTGCCT GATCCAAACT CATCGGTCAG TCCAGCAAGC
GAGTATGGAA ATGATCAGCA AAATAATTTA AAAACAGATA ATATTAAAAA TACACTTTTA
GAACAACCTA AAGATCAATT ATTTGAAAAA ATAAAAGCGC TAGAAGATGA ATTGACAATT
GTTAATGAGC AATTAGCTGA TGCGACAAAA ACCAATGAGG AATTTAAAAC AAGACTGCAA
CAGTTAATTG ATAAAATAGA TATTCTAAAA CCTAAAATTG AGGATGAAAG CGCAGCTCAA
CTCACTCTTT TAAAACTGCT TAATCAGTCT AAACCTGAGC CCAATTCAGC TCAACAGTCT
GTGATTAATA GAACGGGTGT AAACGATCAA AAAGGGTCAT GGATAAAAAT AGTCTTAAGC
AATTTGCTGC TTATTACCGG TGGCGTATTA TTACTAATAG CCCTAATTTT TTCATTGGTA
CTTCGTCGCT GA
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| Protein sequence | MKRLLLIFTC CSPLVLFPAI SFALDSTIST AQEMPSYKKY GPIRYNESLW SVSTKLRPNS
SVSIQQTLLA IYKLNPDAFV AADINNFIED AMINVPTYTF IKKQSHQDAI NLINNFSGKS
KTATKSVAIA KSKKVIIIKS PSLSKQATVT IVDTGDQSLT ASLIDKKHLP DPNSSVSPAS
EYGNDQQNNL KTDNIKNTLL EQPKDQLFEK IKALEDELTI VNEQLADATK TNEEFKTRLQ
QLIDKIDILK PKIEDESAAQ LTLLKLLNQS KPEPNSAQQS VINRTGVNDQ KGSWIKIVLS
NLLLITGGVL LLIALIFSLV LRR
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