Gene Ping_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1963 
Symbol 
ID4627040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2386997 
End bp2388367 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content40% 
IMG OID639797128 
Producthypothetical protein 
Protein accessionYP_943330 
Protein GI119945650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0643426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.380201 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAA AATCACTTCT TGCCGTTGCA CTTGCTTCGA TTCTAACCGG TTGTGGTACT 
GATACAGGAA CAACTGGTAT AGGAACATCC GATGGTACAA ATGGAACAGC AACTACTTAT
ACCGTTATTG ATGGTTATTT AAGCTATGCT GAAGTTTCTA TTCTTTTATC CGATGGCATC
ACAGAAAAGT TTATTGGTGA TACGGGTGTC AATGGTAAAA TATCGATCCC GGCTCAAGAT
CAAGATTATA CGGTGATAGC GAAGATCATT GCAGGCAAAA CGATTGACGC TGATAACCCT
GGAATACCTG TTGCAAAAAG TTATGAAATG CGCGGCACAG TAGATTCTAA CGTTGTGACT
CCTTTTACAA CCCTTGCTAA TACTAATGTG ATGACATTAA CAGCGCTTGC CGCTGAGCTG
CAACTCGACG AAGCGGACGT AAGCGGTGAT TATATGAACA CACCGGACGG TAGAGCACGT
TTTGTGGCGC GCGGCCTGGC CAAAAAATTC GATGATGATA GCAGCAATGA TCATGATGAT
GCTGATGGCT TAAAAACCTA TGCAAACGAT TCAGTTTCTT ATATTGACAC TAATTTTACT
GATAATGATG ATCTTGACGA AGTTGAACTG GATGATAATA GCAATGATGG TAACTGGAGC
CATCACGATC GTATTGCCGG CGTTGTCGAT TTTATTCAAA CTCCCAGCTA TCTTGCTAGC
TTTAATCAAG CACAGTTTAA CGACGAAGGT ATTTTAAGGG CATCATTTTC CCTTACTGAT
AACACAGTGA CATTAGATCA ATACGTTTCT GGGTTAGTGC CACAGAATTC ACGAACGGCT
GATTATAGAA TAGACGAAAA TAAAATTATC ATTAACCAAG GCCAAGGTAG TGATGAGGAT
GAATTTATCT ATATGGCTAA TAAGTTCGCG TTAGCTGTGA CCTCTGAGTA TGATCTTTTG
GTTTGGTCTA AGTCAGATCC AAAAGTTCAG CAAACAACAG CGTTTACTGC AACTGAATTA
GACGGTCAAA CCTGGCATTA TGTTGCCGAT GACTCTACCT CAAAAAAACC GAAAATTATG
AATGCAGCGT TGACCTTCTC TGCTATTACA GGAAAAGTCA CTATCAACAC GCATAAAAAT
ACTGATCCAG TGGTAGATGC ACCATACTCT GTGGACTCGA ATGGTAAATA TTCTATTGAT
CTACCAGCTT CAATTACCGA TGGGAACGGA ATGACGCTTA CGTTTAGCAA AATGGTAGGT
AACGAGGACA TGATTATTAT TATGGATAAT TTGGGTAAAC CCGCCTTACT GACTGCCGAT
AAAAAATTCG CTGATAGTAT TGTTCATAAA TGGACTGATG TTGCTGAATA A
 
Protein sequence
MLKKSLLAVA LASILTGCGT DTGTTGIGTS DGTNGTATTY TVIDGYLSYA EVSILLSDGI 
TEKFIGDTGV NGKISIPAQD QDYTVIAKII AGKTIDADNP GIPVAKSYEM RGTVDSNVVT
PFTTLANTNV MTLTALAAEL QLDEADVSGD YMNTPDGRAR FVARGLAKKF DDDSSNDHDD
ADGLKTYAND SVSYIDTNFT DNDDLDEVEL DDNSNDGNWS HHDRIAGVVD FIQTPSYLAS
FNQAQFNDEG ILRASFSLTD NTVTLDQYVS GLVPQNSRTA DYRIDENKII INQGQGSDED
EFIYMANKFA LAVTSEYDLL VWSKSDPKVQ QTTAFTATEL DGQTWHYVAD DSTSKKPKIM
NAALTFSAIT GKVTINTHKN TDPVVDAPYS VDSNGKYSID LPASITDGNG MTLTFSKMVG
NEDMIIIMDN LGKPALLTAD KKFADSIVHK WTDVAE