Gene Ping_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1961 
Symbol 
ID4627002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2385580 
End bp2386389 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content40% 
IMG OID639797127 
Producthypothetical protein 
Protein accessionYP_943329 
Protein GI119945649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00021169 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.475569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAA AATCTCTTCT TGCCGTTGCA CTCGCCACCA TTCTAACCGG TTGTGGAGGC 
TCATCTGATA GTACTGATCC AGGATCAACC ATTTATACCG TTATTGATGG TTATTTAAGT
GCCGCGGAAG TTTATGTTCT CTCACTCGAT GGCAGCACAA AAACGCTAAT CGGTGAGACT
AATACTAATG GTCAAATACA GATTCCTACT GAATATGAGG GTTATACTGT GATAGCGAAG
ATCATTGCAG GCAAAACGAT TGACAGTGAT AGCCCTGGAA CCTTTGTTAC AAAAAGTTAT
GAAATGCGCG GCACAACAGA TTCTACCGTA GTGACCCCTT TTACAACGCT TGCTAATATT
AATGTGATGA CATTAACAGA TCTTGCTCTT GAGCTCGAAC TCGAGAAAGA TGACGTAAGC
GGGGATTATG TTAATTCACC GGACGGTAAA GCACATTTAG TGGCGCGTAC CCTGGCCGCG
CGATTAGATG ATGATAGCAG TAATGATCAT GATGATGCTG ACCATTTAAA AACCTTAGCA
GGTAATTCGG TTACTTATAT CAGGGATAAC CATGAACAAC ATGGTGATGA TTTAGATACA
GTTGAACTGC ATTATGATAC AGACGATAAT CTTTCCTCTG GAGTTCGTGT CTCTCACCAT
AGCGAATCTA ATGATAACAG TAGCCATAAT GAATTGAATG ATGACAGTAG CTATAACGAA
TCTAATGACA ACAGTAGCCA TAGCGAATTG AATAATGATA GTAGTCATAG CGAATCGAAT
GATGATAGTA ACCATATCGA ATATGATTAA
 
Protein sequence
MIKKSLLAVA LATILTGCGG SSDSTDPGST IYTVIDGYLS AAEVYVLSLD GSTKTLIGET 
NTNGQIQIPT EYEGYTVIAK IIAGKTIDSD SPGTFVTKSY EMRGTTDSTV VTPFTTLANI
NVMTLTDLAL ELELEKDDVS GDYVNSPDGK AHLVARTLAA RLDDDSSNDH DDADHLKTLA
GNSVTYIRDN HEQHGDDLDT VELHYDTDDN LSSGVRVSHH SESNDNSSHN ELNDDSSYNE
SNDNSSHSEL NNDSSHSESN DDSNHIEYD