Gene Ping_1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1917 
Symbol 
ID4624988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2343718 
End bp2343999 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content44% 
IMG OID639797086 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_943288 
Protein GI119945608 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00704104 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTCTAG CAAGTGCTCG TCATATATTA GTAAGTTCTG AAGAAAGCTG TCTCGATATT 
AAACAACAAA TTGAAGCGGG TACTGATTTC GCTGATCTTG CTAAAAAACA CTCTTCATGT
CCATCGGGTG CTCAAGGCGG CGCGTTAGGA GAATTTGGAC CAGGTATGAT GGTGCCAGAA
TTTGATGCGG TGGTATTTAG TGCAGACGTA GGTTCTGTTC AGGGTCCCGT TAAAACTCAG
TTCGGTTACC ACTTATTAGA AGTTACAAGT CGTCAAGACT AG
 
Protein sequence
MALASARHIL VSSEESCLDI KQQIEAGTDF ADLAKKHSSC PSGAQGGALG EFGPGMMVPE 
FDAVVFSADV GSVQGPVKTQ FGYHLLEVTS RQD