Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1889 |
Symbol | |
ID | 4624866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2295030 |
End bp | 2296337 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639797062 |
Product | 4-aminobutyrate aminotransferase |
Protein accession | YP_943264 |
Protein GI | 119945584 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.148357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0202633 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAATG AAACATTACA AAATAGAAAA ACAAAAGTTA TCGCACGCGG TCAGGGTAAT ACTTATCCGA TTTATGTCGA CCATGCAAAA AATGCTGAAA TTTGGGATGT TGAAGGCAAC CGCTATATTG ATTTTGGTGC CGGTATTGCG GTCTGTAACA CTGGCCACAG CCACCCTAAA GTTATCGCTG CCGTTAAACA GCAAGTGGAT AAATTCAGCC ATACCTGTGT GATGGTTAAT CCCTATGAAG TAGCTGTCGA GCTGGCTGAA AAATTAACCA AGCTGGCACC AGGTAATTCC CCTAAAAAAG CCATTTTTGT AACTACAGGT GCGGAAGCGG TTGAAAACTG TGTGAAGATT GCCCGTGCCC ATACGGGTCG TCGTGGCGTC ATTGCATTTA ATGGCGGTTT CCATGGCCGT ACTAATTTGA CCATGGCACT AACGGGTAAA GTTACCCCGT ACAAAAACCT GTTCGGTCCA TTCCCAGCAG ATATCTTCCA TGCCCCTTTC CCAATGGAGC ACCATGATGT CTCAGTAAAA GATTCATTAA AAGCATTACA AAACTTATTC AAAGTGGATA TTTGCCCAAG CGATGTTGCT GCTATTATTG TTGAGCCGGT ACAAGGCGAG GGCGGATTTT ACGCGGCGCC GACTGAATTT TTACAGGCAT TACGTAAAAT TTGTGACCAA CATGGCATTG TCTTAATTGC CGATGAAATT CAGACTGGTT TTGGTCGTAC GGGTAAAATG TTTGCCTTTG AACATGCGGG TGTTGAAGCT GACTTAATGA CCATGGCAAA AGGGATTGCC GGTGGTTTTC CTCTTTCTGC GGTTGTGGGT AAAAGTGAGA TCATGGATGC ACCTTTACCG GGTGGTCTTG GCGGAACTTA TGGCGGCTCG CCGGTTGCAT GTGCGGCGGC ATTAGCGGTA CTGGAGGTGA TGGAAGAAGA AAACCTTGTA CAACGTTCAG TGCAAATTGG TGAACGCTTT AATCAACGTC TGAACCTGCT AAAAACGCAG CGCCCCGATC TTGTTTTAGA TGTGAGAAAC CAAGGCTCAA TGATTGCAAT TGAGTTTGTC AAAAATGGTG ATCCGGAGCA ACCCAATACC GAATTAACCC AAGCTATTAT TGCTAATGCT GCTCAACACG GGTTAGTACT TTTAGCCTGT GGATTTTACG GCAATGTAGT CCGTTTTCTT CCTCCACTGA CTATATCTGA TGCCGTGGTT GAAGAAGGTT TAAATAACTT TACCGCGTTA TTTGAAAGCC TAACAGCTGA GTCTGAAGAG AAGCGAAAAG TAGGTTAA
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Protein sequence | MSNETLQNRK TKVIARGQGN TYPIYVDHAK NAEIWDVEGN RYIDFGAGIA VCNTGHSHPK VIAAVKQQVD KFSHTCVMVN PYEVAVELAE KLTKLAPGNS PKKAIFVTTG AEAVENCVKI ARAHTGRRGV IAFNGGFHGR TNLTMALTGK VTPYKNLFGP FPADIFHAPF PMEHHDVSVK DSLKALQNLF KVDICPSDVA AIIVEPVQGE GGFYAAPTEF LQALRKICDQ HGIVLIADEI QTGFGRTGKM FAFEHAGVEA DLMTMAKGIA GGFPLSAVVG KSEIMDAPLP GGLGGTYGGS PVACAAALAV LEVMEEENLV QRSVQIGERF NQRLNLLKTQ RPDLVLDVRN QGSMIAIEFV KNGDPEQPNT ELTQAIIANA AQHGLVLLAC GFYGNVVRFL PPLTISDAVV EEGLNNFTAL FESLTAESEE KRKVG
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