Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1888 |
Symbol | |
ID | 4624865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2293464 |
End bp | 2294921 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639797061 |
Product | succinic semialdehyde dehydrogenase |
Protein accession | YP_943263 |
Protein GI | 119945583 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000160423 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0242248 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGAGA TACAAGATAG TCAATTAATC AAAACCTTTT CATATATTGA TGGCAGCTGG CATAGCAGTG AATCTTATTT TAATGTTACC AATCCTGCTA CGGATGAAGT CCTTGTTAAA GTATGTAATG CAGGGATTGT TGAAACTGAG CTTGCTGTAA AAGCGGCAAA AACTGCTTTA AAATCTTGGT CAGCAAAATC TGCTAATGAA CGCGCATCGT TAATGCGTAA CTGGTTCAAT TTAATGATCC AACACCAGGA TGATTTAGCG CGCATTCTAA CGCTTGAGCA GGGTAAACCT TTTGTCGAAG CAAAAGGGGA AATCGCCTAT GGTGCGGCTT TTGTTGATTG GTTTGCCGAA GAAGGAAAAC GCGTTTACGG TGATGTTATT CCCGGACCAT CGGGTGACAA GCGTGTCATC GTGGTTAAAC AACCCGTTGG TGTCGTCGCC TCAATCACTC CTTGGAACTT TCCAAATGCA ATGATTGCAC GAAAAGCAGC AGCGGCGTTA GCGGCAGGTT GTACCTTCGT TGTTCGCCCC GCAACACAAA CACCGCTGTC TGCACTTGCA ATGGCAGAAC TTGCTGAAAG AGCGGGTATT CCAGCGGGTG TCTTTAACGT GGTCGTCGGT GAAGATGCAT CGGGCATGGG CAAAGTACTA ACTCAGCACC CTGATATTGC TAAATTTACG TTCACCGGAT CAACAAAAAT CGGTAAACTA TTAATTGGCC AATGTGCGAC TACCGTAAAA AAAGTATCAA TGGAATTGGG CGGTAATGCT CCCTTTATTG TCTTCGATGA TGCAGATATC GATGCTGCTG TAGAAGGCGC AATAGCCTCT AAATATCGTA ATGCAGGACA AACCTGTGTG TGCACCAACC GCATTTTTGT ACAAAATAAG GTACTTGATT TATTCACTGA AAAATTTAGC GCTGCAGTGG CTAAATTATC ATTAGGCAAT GGTTTAACCG ACGGCGTCAA TATAGGTCCA ATGATCTCAA CTACCGCCGT TGATGGTGTG AATAAGCTGG TAGCTGACTC TGTTGCACAG GGCGCAAAGG TTCTCTTAGG CGGACAGCGA GATAGTGCCG GTGACAACTT CTATCAAGCA ACTATTTTGA CCAATGTAAG TAATGACATG CCGGTTGCAC GCAACGAAAT CTTTGGCCCT GTCTCGCCAA TTATTGCCTT TGACGATGAA GATCAAGTGA TTGCCATGGC AAATGATACT GAATATGGCC TAGCCGCTTA TTTTTACTCC CGTGATATCG GTCGCGTTTG GCGCGTTGCA GAAGGCCTTG AATATGGCAT GGTTGGCATT AATGAAGGTA TTATCTCGAA TGCAGCAGCT CCCTTTGGTG GCGTAAAAGA ATCAGGCAGT GGCCGTGAAG GCTCTAAATA TGGATTAGAT GATTACTTAG AAATTAAGTA TTTATGTATG GGCGGCTTAA ATAAGTAG
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Protein sequence | MHEIQDSQLI KTFSYIDGSW HSSESYFNVT NPATDEVLVK VCNAGIVETE LAVKAAKTAL KSWSAKSANE RASLMRNWFN LMIQHQDDLA RILTLEQGKP FVEAKGEIAY GAAFVDWFAE EGKRVYGDVI PGPSGDKRVI VVKQPVGVVA SITPWNFPNA MIARKAAAAL AAGCTFVVRP ATQTPLSALA MAELAERAGI PAGVFNVVVG EDASGMGKVL TQHPDIAKFT FTGSTKIGKL LIGQCATTVK KVSMELGGNA PFIVFDDADI DAAVEGAIAS KYRNAGQTCV CTNRIFVQNK VLDLFTEKFS AAVAKLSLGN GLTDGVNIGP MISTTAVDGV NKLVADSVAQ GAKVLLGGQR DSAGDNFYQA TILTNVSNDM PVARNEIFGP VSPIIAFDDE DQVIAMANDT EYGLAAYFYS RDIGRVWRVA EGLEYGMVGI NEGIISNAAA PFGGVKESGS GREGSKYGLD DYLEIKYLCM GGLNK
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