Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1887 |
Symbol | |
ID | 4624864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2292368 |
End bp | 2293294 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639797060 |
Product | transcriptional regulator of LysR family protein |
Protein accession | YP_943262 |
Protein GI | 119945582 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0293144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0439695 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATAAAA CATCGATAAT TCCTAAGCCG CTCGCTGAAT ATGATTTACG CTTGTTACGT ATTTTTGTTT CAGTTGTAGA TCATGGGGGG TTTTCGGCTG CGGAATCAGC CCTTGGTATT ACCCGCTCGA CGATCAGTAT TCATATGTCA AATTTAGAAG AGCGCATGAA GCTCAAACTA TGTTTACGGG GGCGAGGTGG ATTTTCGCTC ACGGAAGACG GGCAAACAAT CTACCGCGCA GTGATAAATT TATTTGAATC GCTGAATGAT TTCTCACTCT TGGTGGGCAC TTTAAGCAAA GAGCTAAATG GTGAGTTGGT CATTTTGTGC GACGACCAGT TAAACCGTTC CAGACAAAAT AAACTCGCTG AAGTCGTGCA ACTTATTCAT AAAAACTCTC CAAACCTGCA CCTTGTTTTA GACGGTGAGC CAATCTCTAA TATTGAAAAA TCATTGTTAA AAGATAAAGC ACATATCGGT TTGTTCCCTG ATTACCAGCA TATAGAAGGG CTGCATTACC AGCACCTGAT GAGTGAAGCT GTGTATCTTT GCTGCGCTAA AAAACATCCT TTTTTTAATA AAGTCGATAC GTTAATCAGT CCAGCGGAAC TCGCCAGTGT GCCCGCTATT CATCCCGGTA TTGATATCGA TTCATTAGGT ATTGAGCAGC TTAAAAAATT AAATTTGGCG GCCAAGTCTT ACCAATTTGA TACTCGAAAA GCGATGATTT TATCGGGTTG TTATATCGGA TTTATGCCTC AAAGTTATAT TCAGCATGAG CTAAATCACG GAGAAATAAG AATTATTCAA CCCAGCCAAT TGACCTATCC ATTTAATTTA TCACTGGTTG CAAAAAAATC GCCCAGAGAG GCGAATAAAG TGAAATTATT AACCGATATA TTTAATCGTG TTTTTGATCC CCAATAG
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Protein sequence | MNKTSIIPKP LAEYDLRLLR IFVSVVDHGG FSAAESALGI TRSTISIHMS NLEERMKLKL CLRGRGGFSL TEDGQTIYRA VINLFESLND FSLLVGTLSK ELNGELVILC DDQLNRSRQN KLAEVVQLIH KNSPNLHLVL DGEPISNIEK SLLKDKAHIG LFPDYQHIEG LHYQHLMSEA VYLCCAKKHP FFNKVDTLIS PAELASVPAI HPGIDIDSLG IEQLKKLNLA AKSYQFDTRK AMILSGCYIG FMPQSYIQHE LNHGEIRIIQ PSQLTYPFNL SLVAKKSPRE ANKVKLLTDI FNRVFDPQ
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