| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1745 |
|---|
| Symbol | |
|---|
| ID | 4626710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 2126548 |
|---|
| End bp | 2127954 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639796926 |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family protein |
|---|
| Protein accession | YP_943128 |
|---|
| Protein GI | 119945448 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATGCTG AATTTAAGGG AAATTTCAAA GATGCCCCAA CTGTTCTGAT TGTTGACGAT
GATCCAGATA TCTGTTCATT GCTGTCCTAT TTGATGAAAC GGGAAGGGTA TGTTGTACAA
ATTGTTCATG ATGGTATGGC TGCTCTCGAC CTAACACGTA ACCGGGCACC CGATATTATA
CTAACTGATT TACGAATGCC CCGTATGGAT GGCTTCGAGT TACTAAAGCA GGTAAAGCTG
ATCAAACAGG ATCTACCCGT TGTGATACTC ACCGCCTATG CTGGTATTAA CGGGGCTGTC
GAATCAATCA AGGCGGGGGC TGATGATTAC TTACCCAAAC CTTTTGATAA CAGTAAAGTG
GTGATGCTGG TTCACAGAAT CCTTCTTCAG CATCACTGTT ATAAAATTGA TGAGCAGCCA
ATTGAGGGGG GTGTTCATGA TATTGTTACT GTGATGGGAC CCAGTGCTAT TATTCACACC
TTGGCCGCTC AGGTTAAGCT GGTCGCGCAA TCCAATTTCA ATGTTATTAT TCAAGGTGCC
ACTGGCGTCG GTAAAGAGGT GGTGGCCCAA GCTATCCATG CTCAGAGTCC ATACGCTTCG
GGTCCCTTTG TGCCGGTGGA TTGTGGCGCG ATCCCGGAAA TGCTATTGGA GAGTGAACTT
TTTGGCCACG AAAAGGGCGC TTTTACGGGT GCGTACCGAG CAAAGCAAGG CAAGTTCGAA
GCTGCTCGAG GTGGCACCTT GTTTCTGGAT GAAATTGCCA ATATGCCACT GACTTCTCAG
GCTAAAATTC TGCGAGTTAT GCAGGAAAAA ATTATTTTTC CGGTAGGGTC AAACCAGCCT
ATTAAAATTG ATGTGCGCCT TATAGTGGCT AGCCATGAAA ATTTAGAAGC TAAGGTGGCT
GATGGAACTT TTCGAGAAGA CCTCTATTAC CGATTCAATG AATTCACTAT AAAAGTACCG
CTGTTGTCTG AACGAAAGGA AGATCAGATT TATCTTGCTA AGCGATTTAT GAACGAGACT
AACCGAGAGC TTGGCAAAAA CGTGACTCTT TCGATAGGCG CGATTAACAA AATGCAGACC
TATGAATGGC GAGGAAATGT GCGCGAATTG CGTGCGGTGA TCCGCCGTGC GGTTCTCTTG
GCGCAAACCG AAATTAGGGA AGAGCATCTT GCCATTATAA ATAAAAGCAG CAAGAGGAAT
GAATCTGGTC AGCTAAATGG TATCAATTTT ACAACCGCAT CTTCCCCACC TTTGAAGGAA
ATAGTTCGTG ATTGCAGCGA GAGAGTAGAA AAGAAGACCT TAACGCAGGT ACTGAGTCAA
ACCAATGGTA ACAAGGCTGA AGCAGCACGT ATCCTGAAAA TAGATTATAA AACGCTACTT
AACAAAGTAA AGTATTATGA ATTATAA
|
|---|
| Protein sequence | MNAEFKGNFK DAPTVLIVDD DPDICSLLSY LMKREGYVVQ IVHDGMAALD LTRNRAPDII
LTDLRMPRMD GFELLKQVKL IKQDLPVVIL TAYAGINGAV ESIKAGADDY LPKPFDNSKV
VMLVHRILLQ HHCYKIDEQP IEGGVHDIVT VMGPSAIIHT LAAQVKLVAQ SNFNVIIQGA
TGVGKEVVAQ AIHAQSPYAS GPFVPVDCGA IPEMLLESEL FGHEKGAFTG AYRAKQGKFE
AARGGTLFLD EIANMPLTSQ AKILRVMQEK IIFPVGSNQP IKIDVRLIVA SHENLEAKVA
DGTFREDLYY RFNEFTIKVP LLSERKEDQI YLAKRFMNET NRELGKNVTL SIGAINKMQT
YEWRGNVREL RAVIRRAVLL AQTEIREEHL AIINKSSKRN ESGQLNGINF TTASSPPLKE
IVRDCSERVE KKTLTQVLSQ TNGNKAEAAR ILKIDYKTLL NKVKYYEL
|
|---|
| |