Gene Ping_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1608 
Symbol 
ID4624637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1962963 
End bp1963802 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content42% 
IMG OID639796794 
Productmodification methylase, HemK family protein 
Protein accessionYP_943004 
Protein GI119945324 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0638974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.595082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTATTG ACGACGCGCT TGCTTGGGCA AAGTTTACTC TGGTCAACAG CGAAAGTGCG 
TTATTAGATG CGCAGGTACT GTTAGCGTTT GTTTTAGAAA AAGAAACCGT TTACCTGATG
ACTTGGCCTG AGCGTGAGCT TAGCCAAGCG CAAAAAAGTG CTTTTGAGGG ACTAATTAGT
CAGCGAGTAA AAGGTGTTCC GGTTGCCCAT TTAACGGGTG CCAGAGAGTT TTGGTCGTTG
CCTTTAAAAG TGAATAATTC AACATTGATA CCGCGCCCTG ACACTGAACT ATTGGTTGAA
GCTGCCCTTG ACTATTGCAG CGCCGATGCC CGTATTTTAG ATCTCGGTAC AGGGAGTGGG
GCGATTATTT TGGCACTAGC CAGTGAATTA CCTGATGCCT ATTGTCTGGG TGTTGATGTT
AATGAAAGCG CGGTGCAGCT GGCGATTGAA AATGGAAAAA ATTTAAAGCT TAACAATGTT
CATTTCCAAC AGAGCAATTG GTTTGATAAT ATTAACGGCT TGTTTGATGT GGTTGTTTCA
AATCCGCCTT ATATTGAAAA AAATGATCAT CACCTTAAGC TGGGAGATGT TCGTTTTGAG
CCTTTGTCGG CTTTAGTGGC GGATGAAAAT GGTCTGGCAG ATATTCGTAA AATTGCACAA
AAAACGCCGG AATATCTTAA AAAAGGGGGC TATTTATTGG TTGAACATGG TTTTAACCAA
GGTTCAACAG TTCGAGAATT ATTCACTGAC CTAGGTTATT CAGAGGTTAT TACCATTAAA
GACTACGGAG ATAATGATCG CGTTACGATG GGATTGTTTA ACCAACCTAA TTCACTATAA
 
Protein sequence
MSIDDALAWA KFTLVNSESA LLDAQVLLAF VLEKETVYLM TWPERELSQA QKSAFEGLIS 
QRVKGVPVAH LTGAREFWSL PLKVNNSTLI PRPDTELLVE AALDYCSADA RILDLGTGSG
AIILALASEL PDAYCLGVDV NESAVQLAIE NGKNLKLNNV HFQQSNWFDN INGLFDVVVS
NPPYIEKNDH HLKLGDVRFE PLSALVADEN GLADIRKIAQ KTPEYLKKGG YLLVEHGFNQ
GSTVRELFTD LGYSEVITIK DYGDNDRVTM GLFNQPNSL