Gene Ping_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1605 
Symbol 
ID4624634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1959862 
End bp1960308 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content37% 
IMG OID639796791 
ProductOuter membrane lipoprotein OmlA 
Protein accessionYP_943001 
Protein GI119945321 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2913] Small protein A (tmRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.730668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.548797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATTA AAAATATCGC CACCTTTTTC TTTCTTATTT TTGCACTCTC GGGATGTACA 
TCTCTTTATG ATACCTTTGT ATATCAAATT GATGTTACAC AGGGTAATTA CATTGAGGAT
GAAAAATTAG ATCAAATACT CCTTGGTATG TCTCAAGAAC AAGTTATTTT TATTCTTGGC
TCTCCCATGT TGATTGATCA ATTCGATTCA TCAAAATGGT ACTATATTCG TTACATTAAA
CCGGGTGGAG AACCGATTCA ACAGGACAAA GTCGTTTTTA CCTTTGACAA TCTGCTGCTG
ACCGATATTG CAAGAGAAGG TACAATTGAT ATAAATCCGC TGATTAAAAC GCCTAAGGCA
AGAAATGTGC CGAATGCAGC GACTGAAGAC CCCAGCACTA GCGATAACCC GCAAACAGAT
AATGACACAC CAGTTATTGT TAATTAA
 
Protein sequence
MPIKNIATFF FLIFALSGCT SLYDTFVYQI DVTQGNYIED EKLDQILLGM SQEQVIFILG 
SPMLIDQFDS SKWYYIRYIK PGGEPIQQDK VVFTFDNLLL TDIAREGTID INPLIKTPKA
RNVPNAATED PSTSDNPQTD NDTPVIVN