Gene Ping_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1530 
Symbol 
ID4626196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1877172 
End bp1877549 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content38% 
IMG OID639796729 
Producthypothetical protein 
Protein accessionYP_942939 
Protein GI119945259 
COG category[S] Function unknown 
COG ID[COG3651] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.615056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.187499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATGG ATAAATCAGT CAATGTGTTT GGTGAAACAT TAGAAATCTG TTGTGAAAAC 
CCAATCACCG GCTTTTACCG CGATGGTAAA TGTAATACCA ATAAAAATGA TGCGGGTTCG
CATACGGTTT GTATTAAAGT AACCAAAGAG TTCTTGGAAT ATTCAAAGTC TAGAGGTAAT
GATTTATCTA CACCTGCACC TGAGTTTAAT TTTAAAGGTT TAAAGCCTGG AGATAGCTGG
TGTGTCTGTG CCTCTCGATG GTTAGAGGCT GAGAAAAATA ATATGGCGCC CAGAATTCAT
CTTCAAAGGA CTCACATTAG AGCGATAGAG ATTGTGCCAA TGGCGTTACT AAAAAAATAC
GCTGCTGATC TGAATTAG
 
Protein sequence
MDMDKSVNVF GETLEICCEN PITGFYRDGK CNTNKNDAGS HTVCIKVTKE FLEYSKSRGN 
DLSTPAPEFN FKGLKPGDSW CVCASRWLEA EKNNMAPRIH LQRTHIRAIE IVPMALLKKY
AADLN