| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1494 |
|---|
| Symbol | |
|---|
| ID | 4626550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 1841378 |
|---|
| End bp | 1842496 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639796698 |
|---|
| Product | stearoyl-CoA 9-desaturase |
|---|
| Protein accession | YP_942908 |
|---|
| Protein GI | 119945228 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1398] Fatty-acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.190826 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0846838 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAC CCCGTATTCT TTGGCTTAAT GTTTTGTTCT TTTTGAGCAC TTTTTTATTA
GCCGCAATTG CCGTACCTTA CCGTGCTATC ACGCATGGTT TTGATGCGTC CGAAATTATG
TTTGCACTCT TATGTTTTAT TTTCTGTGGC ATGTCCATTA CGGCAGGCTA TCATAGATTG
TGGTCACACA AAACTTATCA GGCACATTGG AGTTTACGTT TTATTTTTGC CTTAGGCGGT
GCATTCGCTT TACAAAACAG CATATTGCAT TGGTCATCGG ATCATCGAAT TCATCATAAG
CATGTTGATA ATAATGATAA AGATCCCTAT TCCGCTAAAA TGGGATTTTG GTATTCACAC
CTTGGCTGGA TGCTGCGTGA ATATCATCCA ACTACTTATG ACGACTATAA TAACGTGCGA
GATTTGCAAA AAGATCCTAT CGTAATATGG CAGCATAAGT ATTATTTGTT GTTAACACTG
CTGCTAAATA TTGGCATACC GTTATTTTTT GGTTTTTGGC ATGGTGATAT CATTAACAGC
ATCCTATTAG TGGGGTTTTT ACGTTTAGTG TTAAGTCACC ATACCACTTT CTTTATCAAC
TCATTAGCGC ATATCTGGGG GAAACAAACC TATAGCGATA AAAACAGTGC AAGGGATAAT
GGTTTTTTGG CCTTTCTTAC CTTTGGTGAG GGCTACCATA ACTTTCACCA TATTTTTGAA
AATGATTATC GGAATGGTAT CCGTTGGTGG CAATTTGATC CGACTAAATG GTTGATAAAA
AGTTGTGAAT ATCTGGGGCT GACCAGTAAA TTACGCATCA GTCCTGAAGA TCGGTTGGAA
AAAGCTAAAT TAGCCATGAC CTTAAAGCGC AGTCAACAAA AATTAGCAAC ATACCCTAAT
CCGGAAAAAA TGCTTGAACG TTTACAATCC GAATATGATC TGCTTATTGT TAAAATAAAT
GAGTATTATG CCGTACATAA ACAATTGTTG TCAGAAAGAA AAAAAGAACT TGTGAATGAT
GTTGAAAATT CAGAGTTAAT AAAAACCTGT CTGGAATTAA AAAAATGTGT AGCAGAGCAG
CAACGCAGTT GGAAATTATT AACCGCTAAA TTTGTTTAA
|
|---|
| Protein sequence | MNKPRILWLN VLFFLSTFLL AAIAVPYRAI THGFDASEIM FALLCFIFCG MSITAGYHRL
WSHKTYQAHW SLRFIFALGG AFALQNSILH WSSDHRIHHK HVDNNDKDPY SAKMGFWYSH
LGWMLREYHP TTYDDYNNVR DLQKDPIVIW QHKYYLLLTL LLNIGIPLFF GFWHGDIINS
ILLVGFLRLV LSHHTTFFIN SLAHIWGKQT YSDKNSARDN GFLAFLTFGE GYHNFHHIFE
NDYRNGIRWW QFDPTKWLIK SCEYLGLTSK LRISPEDRLE KAKLAMTLKR SQQKLATYPN
PEKMLERLQS EYDLLIVKIN EYYAVHKQLL SERKKELVND VENSELIKTC LELKKCVAEQ
QRSWKLLTAK FV
|
|---|
| |