Gene Ping_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1488 
Symbol 
ID4625828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1836489 
End bp1836941 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content39% 
IMG OID639796692 
ProductGAF domain-containing protein 
Protein accessionYP_942902 
Protein GI119945222 
COG category[T] Signal transduction mechanisms 
COG ID[COG1956] GAF domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.320818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.116131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTTA AAGATTATAA ATTATTAAGC CAACAAGCCG TTGCATTAAT TGCAGATGAA 
ACGGATTTAA CTGCAAACCT TGCGAATCTC AGTGCATTAC TCAATATGAA CTTGGATAAT
ATTAATTGGG TCGGGTTTTA CTTGTTAAAG GATAACCAAT TAGTTTTAGG TCCTTTTCAA
GGCCAGCCCG CCTGTATTCG TATTCCCTTA AATACAGGCG TGTGTGGAAA AGCATTTTCT
ACCAATACGA TTCAAAGAGT GGCCGATGTG CAGCAATTTG TAGGACATAT TGCCTGTGAT
GCAAACAGCC AATCTGAAAT AGTTTTACCT ATCAGTCTAC AAGGAGCACC TGCGCTGCTA
TTAGATATAG ATAGCCCGAT TAAAAACAGG TTCACACAAA ACGATCAAGA TGGACTAGCC
TACTTGGTTG AACAGATACA ACAGCACCTG TGA
 
Protein sequence
MTFKDYKLLS QQAVALIADE TDLTANLANL SALLNMNLDN INWVGFYLLK DNQLVLGPFQ 
GQPACIRIPL NTGVCGKAFS TNTIQRVADV QQFVGHIACD ANSQSEIVLP ISLQGAPALL
LDIDSPIKNR FTQNDQDGLA YLVEQIQQHL