Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1475 |
Symbol | |
ID | 4625815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 1823709 |
End bp | 1824923 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639796681 |
Product | aminotransferase AlaT |
Protein accession | YP_942891 |
Protein GI | 119945211 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.714124 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATACCA TTCAAAAGTC CACTAAATTA GATAATGTCT GTTATGACAT TCGCGGACCC GTCCTTAAAC AAGCGCATAA ATTGGAGGAA GAAGGACAGC GTATTTTAAA ACTAAATATC GGTAATCCTG CCCAATTTGG CTTTGATGCA CCTGAAGAAG TGATGATGGA TGTGATAAAA AACCTGCCGC AAAGTCAGGG GTATTGTGAC AGCAAAGGCC TTTTTTCCGC CCGTAAATCG GTTATGCAGC ATTATCAGGC GAAAGGTTTA CTGTCACTTG ATACCCATGA TATTTATATT GGCAACGGAG TCAGTGAATT AATTGTAATG GCGATGCAGG GTTTATTAAA TAATGGTGAT GAGCTATTGG TACCTGCACC GGATTACCCG CTATGGACAG CCGCAACAAA TTTATCCGGC GGGAAAGCGG TCCATTATAT TTGTGATGAA CAGTCAGATT GGTTTCCCGA TATCGAGGAT ATTAAATCTA AAATAACCGT CAAAACCAAA GGGATTGTTA TTATCAATCC CAATAATCCC ACCGGCGCGG TTTACAGCAG GGAGTTATTA GAGCAGATTA TAGAGCTTGC CCGTATCCAC AATTTAATTG TCTTTTCCGA CGAAATCTAT TCGAAAATAA TTTACGATGA TGCGGTGCAT ATTCCACTCG CAACCCTCGC TGACGATATT TTAATTGTGA CCTTTGATGG ACTATCTAAA GCCTATCGGG TTTGCGGTTT TCGCGTCGGT TGGATGATGA TAAGCGGCGC AAAAAAGCAA GCGCGTGATT ATATTAATGG ATTAGAGATG CTCGCCAGTA TGCGTTTATG CGCCAATGTG CCGATGCAGC ATGCTATCCA AACTTCCCTT GGCGGGTATC AAAGTATTAA TGAGTTAACC GTCCCAGGCG GACGTTTATA TGAACAAACT CAAAGTGCAT GGAAGTTAAT TAATGATATT CCCGGGTTAA GCTGTACTAA ACCTAAGGGC GCTTTATACC TTTTCCCTAA ACTGGATCAA AAGAAATTTA ACATTAAAGA CGATCAGCGG TTTGCCATGG ATCTGTTGAT GGAAGAAAAA ATATTAATTG TACAGGGGAC GGGCTTTAAC TGGCACTCAC CGGATCACTT CCGTATTGTT TGTTTGCCGC GTGTTGATGA ACTCAGTACT GCTATCTCGA AAATAGGCCG TTTTCTGCAA AGTTATCGCC AGTAG
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Protein sequence | MYTIQKSTKL DNVCYDIRGP VLKQAHKLEE EGQRILKLNI GNPAQFGFDA PEEVMMDVIK NLPQSQGYCD SKGLFSARKS VMQHYQAKGL LSLDTHDIYI GNGVSELIVM AMQGLLNNGD ELLVPAPDYP LWTAATNLSG GKAVHYICDE QSDWFPDIED IKSKITVKTK GIVIINPNNP TGAVYSRELL EQIIELARIH NLIVFSDEIY SKIIYDDAVH IPLATLADDI LIVTFDGLSK AYRVCGFRVG WMMISGAKKQ ARDYINGLEM LASMRLCANV PMQHAIQTSL GGYQSINELT VPGGRLYEQT QSAWKLINDI PGLSCTKPKG ALYLFPKLDQ KKFNIKDDQR FAMDLLMEEK ILIVQGTGFN WHSPDHFRIV CLPRVDELST AISKIGRFLQ SYRQ
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