| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1466 |
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| Symbol | clpX |
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| ID | 4626025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1811054 |
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| End bp | 1812331 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639796672 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_942882 |
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| Protein GI | 119945202 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.092174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAAATA AAAATGATAG TTTACTTTAT TGTTCTTTTT GTGGAAAAAG TCAGCACGAA
GTAAAAAAAC TGATTGCCGG TCCTTCTGTT TATATTTGTA ATGAATGTGT TGATCTTTGT
GATGATATTA TCAAAGAAGA AATTGCAGAA ATAAACAGTG CAAGTGAATC GACAACGAGC
GATAAAAAAT TACCAACACC ACATGAAATT CGTGACAATC TGGACGATTA TGTTATTGGT
CAAGACACAG CAAAAAAAGT CTTGTCAGTT GCGGTATATA ACCATTATAA GCGTTTAAAG
CATGGTGCTA TTTCTGATGG TGTTGAGCTC AGTAAAAGTA ATATTCTTCT GATTGGTCCA
ACGGGCAGTG GTAAAACACT GCTGGCAGAA ACCATGGCGC GGTTATTAGA TGTCCCCTTT
GCGATGGCCG ATGCAACCAC ACTTACTGAA GCGGGTTATG TGGGTGAAGA TGTTGAAAAC
ATTATTCAGA AGCTGTTACA AAAATGTGAT TATGATGCAG AAAAAGCGCA ACACGGTATT
ATCTACATCG ATGAAATTGA TAAGATAACC CGTAAATCAG AAAATCCGTC TATTACACGT
GATGTTTCAG GTGAAGGTGT ACAACAGGCG TTATTAAAAC TGATTGAAGG TACAGTTGCT
TCTATTCCCC CTCAGGGTGG CCGGAAACAT CCAAATCAAG AGTTTATCCA AGTAGATACT
TCCAAGATAC TGTTTATTTG TGGCGGTGCA TTCTCAGGTT TAGATAGCGT CATTGAACAA
CGTGTTGATA CGGGCACGGG CATTGGTTTT GGTGCAACCG TAAGAGATAA AGATTCAAAA
GCGACGATCA GTGAAACTTT TCAAAAAGTG TTGCCTCAGG ATTTAATTAA ATACGGTCTG
ATTCCTGAGT TTATAGGGCG GTTACCTGTT GTTGCAACAT TAACGGAATT AGATGAACAC
GCATTAGTTG AAATATTAAC GGCACCGAAA AATGCAATCA CGAAACAATA TGCTGCGTTA
TTTGGATTAG AAAATGTCGA GCTTGAGTTT AGAGAAAATG CATTAATCGC AATGGCACAA
AAAGCGATGG GCCGGAAAAC TGGTGCACGT GGGCTGCGTT CAATTGTTGA AGAGGTATTG
TTAGATACTA TGTATGACTT ACCCTCGGTA AAAAATGTCA GTAAAGTTGT TATTGATGAA
AATGTCATTG CTGGTAAGGC AAAACCTCTA CTGATTTATT CGGAAGAGCA AGAACGATTA
GCATCGTCTG ATAAATAA
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| Protein sequence | MPNKNDSLLY CSFCGKSQHE VKKLIAGPSV YICNECVDLC DDIIKEEIAE INSASESTTS
DKKLPTPHEI RDNLDDYVIG QDTAKKVLSV AVYNHYKRLK HGAISDGVEL SKSNILLIGP
TGSGKTLLAE TMARLLDVPF AMADATTLTE AGYVGEDVEN IIQKLLQKCD YDAEKAQHGI
IYIDEIDKIT RKSENPSITR DVSGEGVQQA LLKLIEGTVA SIPPQGGRKH PNQEFIQVDT
SKILFICGGA FSGLDSVIEQ RVDTGTGIGF GATVRDKDSK ATISETFQKV LPQDLIKYGL
IPEFIGRLPV VATLTELDEH ALVEILTAPK NAITKQYAAL FGLENVELEF RENALIAMAQ
KAMGRKTGAR GLRSIVEEVL LDTMYDLPSV KNVSKVVIDE NVIAGKAKPL LIYSEEQERL
ASSDK
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