| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1449 |
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| Symbol | |
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| ID | 4624566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1781818 |
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| End bp | 1783740 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639796655 |
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| Product | cyclic-di-GMP regulatory protein |
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| Protein accession | YP_942865 |
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| Protein GI | 119945185 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.957057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGT TTAAGCAGAT AAACTCATTA TTGTTAGGAC TTTTTTTGCT GGTAATGTCC
ACTTTATTTT ATTTTCAGTT TACCGAAACA AGTGCTTTTA TGAGCGATCA AATGGAATCA
GATCTCAATA ATACCAGTAT TTCATTAGGT CTGATGTTAA AACCTCATCT GGAAACGGGC
GATGTAGTGA TGGTTGAAAC CTTAATCAAT GTTATTTTTG AAGGCGGTTT TTATCAAAGG
GTCAGTCTGA CCTGGCTTGC AGATCAAAAA CAGCAAGTAT GGAAGAATCC TGTCATTATA
AATGGGGTAC CACAATGGTT TGTTAACTTG GGGCTATTTA AGGGGCTAAT AAGTGAAACT
GTTATTACAT CAGGGTGGTT ACAGCTGGCA ACGTTGAAAA TCGAATCAAA TCCAGCGATC
GGTTACCGGG AATTATGGCG GATTATGAAA CATATGGTAC TGGCTTTAGT GGTTATTTTT
CTTATCGCAA TTTTTTTATT CCGCTGGCGT TTAAAAACCA TTTTAAAACC CGTAGATCAA
GTTGCAGCAC ATGCCTATGA CCTTGCCCGG TGTAAATTCA GTGAAAATTT ACCCTTACCT
AAAACCACTG AACTTAAAAA AATGGTTGAT GCCGTTAACA CCATGTCCGG ACAATTAAAG
TTAGTGTTTA ATTCTCTTGC TGAGCAAGTG AATATATTAA AAAATGAAAC ATTGTTTGAT
GCTGTTTCGC AGCTTCCTAA TAGACAGTAC TTAGCGGGGC AATTGACCAG TCGCTTAGAT
CAGCCGGGGG TAGGGGCGCT AATATTAGCT AAATTTCCCT GGTTAGATGA AATACACCAT
AAATTTGGTT ATCAGGTACG TGATCAAGCC ATTAAAAAAT TGTCAGATAA CCTGCTGAAA
AGCCTGCCTA AAAGCTTTAT TGCGCGTATT TCAAATACGG AATTTGCTTT TTTAATAATG
GATGCTGATG ATAAACAGAT AACTTATTAT CTGCAGCTGT TAATCCGTTT AATTAATCAG
GAAATTTTGC AGGACGGCTG TATTCCCAAC CGTGATTTTG CGATTGGGTT AAGTGAAAGG
ACCGCGAATG TAACACCCGC CGAATTATTA GCTCAGGCAG ATCATGCTTT GCAAAAAGCG
CTGTTAGAAA ATAAAATCAG CCAATGGTTT AGGCCTCATA CTGAGCAGGA ATTTAGCCTG
GAACAATGGC GAGTTCGTCT TCTGGATGTC ATTAACAAAC ATCAGTTTAT ATTCCAATGG
CAAATGGTAC ACAGCATGGA AAGTGATAGT GTCATGCAGA GAGAGATTTA CAGTCGTTTA
AAAATAGATG AAAAAGTTAC CCAAGCGAAT GAGTTTATAC CCTTTGTTGA ACGCTTAGCA
TTAGGCCATC AGTTCGACAG AAACATACTC GAAGCACTTG TCAAAAGACA GCTGCTAACG
ATTAATAAAG AACCTATTGC AGTGAATTTA ACCCGTGACA GTATAGTCAA TAACGAATTT
CATACCTGGT TAAGTCAATT TTTAAATAAG GTTGCCGATC CGCACCTTAT TCATTTTGAG
TTGCCCGAAG CGGGGGTTTT AAATTATTTA GAGGAAGCGA TTAGACTCTC TGACATTATA
AAAATTAGAG GGGCAAAATG TGGTATAGAT CATTATGGTC AACAGTTAAC ATCCTTTGAA
TACCTGCGAC TGTTAAAACC TTATTATGTA AAATTGGATC TTTCATTGTC TGCTTACCAG
GATCAAGAGA AACCACACAA TCTGAAAAAT CTGGAAATCT GCCGCGCACT GGTCAATATT
GCACATGGCT TTGATATTAA AGTGATTATT ACGGGTATTG AAGACGAGAA GCATCTGAAG
ATGGTCAAAA TTTTGCGGAT TGAAGGTTAT CAAGGTTATA TATCAGGCCC AGTTGACATA
TAG
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| Protein sequence | MTLFKQINSL LLGLFLLVMS TLFYFQFTET SAFMSDQMES DLNNTSISLG LMLKPHLETG
DVVMVETLIN VIFEGGFYQR VSLTWLADQK QQVWKNPVII NGVPQWFVNL GLFKGLISET
VITSGWLQLA TLKIESNPAI GYRELWRIMK HMVLALVVIF LIAIFLFRWR LKTILKPVDQ
VAAHAYDLAR CKFSENLPLP KTTELKKMVD AVNTMSGQLK LVFNSLAEQV NILKNETLFD
AVSQLPNRQY LAGQLTSRLD QPGVGALILA KFPWLDEIHH KFGYQVRDQA IKKLSDNLLK
SLPKSFIARI SNTEFAFLIM DADDKQITYY LQLLIRLINQ EILQDGCIPN RDFAIGLSER
TANVTPAELL AQADHALQKA LLENKISQWF RPHTEQEFSL EQWRVRLLDV INKHQFIFQW
QMVHSMESDS VMQREIYSRL KIDEKVTQAN EFIPFVERLA LGHQFDRNIL EALVKRQLLT
INKEPIAVNL TRDSIVNNEF HTWLSQFLNK VADPHLIHFE LPEAGVLNYL EEAIRLSDII
KIRGAKCGID HYGQQLTSFE YLRLLKPYYV KLDLSLSAYQ DQEKPHNLKN LEICRALVNI
AHGFDIKVII TGIEDEKHLK MVKILRIEGY QGYISGPVDI
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