Gene Ping_1430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1430 
Symbol 
ID4625492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1759014 
End bp1761536 
Gene Length2523 bp 
Protein Length840 aa 
Translation table11 
GC content38% 
IMG OID639796636 
ProductIg domain-containing protein 
Protein accessionYP_942846 
Protein GI119945166 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATACA AAGCAATTGA ATATAAAAAA ATACTGCTTT CTTTTGTACT TTCTTTCATT 
TTGTTAGGTT GCGGCGGTGG AGGTGATGAT GTTGTTAGTG ATAATAGCGA TAACCCGGCA
ACGATTAACG CTATTCGCTT TGCTTCCGAT AGTGCAACTT TGCAGGTAGG TGAAGTATTA
CAAATAACCT CCACAGCCAC TTATTCAGAT TACAGTCAAC ATAGTATAAC GGCTCAAGGT
GATTGGATTT CATCTGATCC AAATGTTGTA TCAGTTTCTC AGGGTAAATT ACGCGCAATC
CGCGGCGGTA ATGCCATGAT TACGCAACGC TATCAAGGGC AGGAGGCGAG TTTGAATACA
CTCGTCACTA TTGATGCCGA TGTTTCTTTA ACCTTGGCCA GTGGCAAGCT GACATTTCGT
TGGAAGTCAG TCTTTACTGA TGAATTGGGC TATCAAATCC AAAGGCAGTC TTTAACAAGA
AGTGTCTCAG AATGGGAAAT TATATCTGAA GTCGGCCCGA TTACCGAAGG TTTTTATGGA
CAACAGGAGG TAGTAGATAC TACAGCAACC TATCGTATAG TGGCAGTTTT TAATCAATGG
GATGAAGTCT TAAGCTCCAG TCAGGGAACA AGTTATTTTA ATTACAATCA AACAAAAGCG
ATGGCGATCA GTATTTTGCC ACCAGTTACC CACCCTCCTT ATTCAGAAAC GGTGACCTTT
GGTTTGTCTC AAAATGTTCT ATCGTCATCA TGGTTTATAG ACAGTAATAA TGCTTGTGGA
AGTTCCGCTT GTAGCAACAA CAGTATTAAT TTAAATACAA AAAGATATAG CGATGGCAAT
CATAGACTGG ATGTGATGGC TGAAATTGAA CCCGATGTAT TTGTATACCT CAATCAAACT
ATTGATATAT ATAACCCTAA TCTCACTTTA ACTATCAGTG TTCAGGATCA GGATTTTAAT
AGCAGTGTTA TTTTAGTTAA AGCGGGCAGT AAAGCTGCAG TATCAGAAGT GAATTATTAC
ATTGATAACC ACTTAGTCGC AAAGCAAACA GAGGAAATAC CCATCACACT TAATCAATGT
GAGAGATGGG GGTGTAATGA TGTGACCTAC CCTTATCATT TTGTCTGGGC AAAAGAATAT
GGCGAGCATC AAGTTAGAGT GACAGCTGTG GACACCGATG GTCAGTATCA GGAGCAAGTA
AAAAACATTT TAATTAATTT AGCACCTATT GTTAGCTTTT CTTCACCTTT AAATAATCAG
TTAATAACCG GAAATTTATT GACCGTCACA GGTGAAGTAG AGAATGAAAA TCAAAATGTG
ACAACAACGG TTTCCTTTGG GGATATTCAG ATAGGGCAAA AGCAAGCCAC AGGCAGTTTC
AGCTATAGTT ATTCTTTAGC GGGATTACCT GAAAGTGATT ATATGGTTTC CATTATTGCC
ACTGATGAAT TTAACGCTCG TGGTACTAAT CAAGTTTCTT TTAAATATGC GCCCAGTTTA
AACGCTGCAA TATTAGTGAA ACACCTGCCT GTTGGCTATT CTGTAGTTGA GATTAATGAT
AGTCAATTGT TAGCTAAGAA TACTGATTTT GAATATTTAA TAACAGATTT AGCTCTATTA
AACCCGGTTG ATAGAGAAGT TAAGTTTGAC AAAAAACCAC AAACTTATAT GTATTATCCC
CATGTTAATA ACAAAGGTTA TTTTGCTTCA GATTATGGAC CAGCAGGTTC TTTAAATATG
TACTTAAATA AATCAGGATC TAACCTTAAT CTAACGGAAT TAGTTTCTGA AGGTAGTGGT
TACGGTTTTC ATAGTAGTTA CATGGGTAAT ATCTTGGTTC AATTACCTAG TAATGGAAGT
GCTTTTTACT TATGGGATAC AGATAATCTA ACCTATGAAT ATCTTAAACC ACCAATAGGC
ACCTCACGCT GGTTAAATTG GAGGTTTACA AATAATGAGG AATGGTTATG CCAATCAGCC
CCCATTGGCT TAGCTTATGA TGTTTATGCC TATCAGTTGG GAAGTGGTGG GCAACCTGTT
CGCTTAACAG ATAACAGCAA CGATATGGGA GGTAGTTTAG GTTATGGCTC TTTCTGTGCA
GGTAATGATA GCGATTATCT GGCTTACAGT ACCTCAGATC AAAATGACAC AACTTCTTCA
TTACACTTAT ATGATTTATA TAATCAGGAA AGTCGTTTAA TTGCAGAAAC AACTGTTGGT
TCAGGTATTT CCAGTCGAGC TCAGTATGCT GATGGGGTGC TCGCCTGGCA GGAAAGCAAT
AGCGGTGCTA ATAACTTAAA AATAATGTCG ATGGATACGG GGGGTAGTTA CTCAATTCCT
AACGCGACTC TGCAAAAAGT CCGTTTTGGT AAAGTGAGCT ACACCACTAG CGAGGGATTA
TTTGTCTGGC TGAAAAGCAG CCAGGAAAGC CGTAAGATAT GGCCATCGAG TACTACTCAT
TATTTAAGCC AGGGAACGAG TTATTTAGTC AGTGGCAGCT TAATTTATCA AATTGATGAT
TGA
 
Protein sequence
MEYKAIEYKK ILLSFVLSFI LLGCGGGGDD VVSDNSDNPA TINAIRFASD SATLQVGEVL 
QITSTATYSD YSQHSITAQG DWISSDPNVV SVSQGKLRAI RGGNAMITQR YQGQEASLNT
LVTIDADVSL TLASGKLTFR WKSVFTDELG YQIQRQSLTR SVSEWEIISE VGPITEGFYG
QQEVVDTTAT YRIVAVFNQW DEVLSSSQGT SYFNYNQTKA MAISILPPVT HPPYSETVTF
GLSQNVLSSS WFIDSNNACG SSACSNNSIN LNTKRYSDGN HRLDVMAEIE PDVFVYLNQT
IDIYNPNLTL TISVQDQDFN SSVILVKAGS KAAVSEVNYY IDNHLVAKQT EEIPITLNQC
ERWGCNDVTY PYHFVWAKEY GEHQVRVTAV DTDGQYQEQV KNILINLAPI VSFSSPLNNQ
LITGNLLTVT GEVENENQNV TTTVSFGDIQ IGQKQATGSF SYSYSLAGLP ESDYMVSIIA
TDEFNARGTN QVSFKYAPSL NAAILVKHLP VGYSVVEIND SQLLAKNTDF EYLITDLALL
NPVDREVKFD KKPQTYMYYP HVNNKGYFAS DYGPAGSLNM YLNKSGSNLN LTELVSEGSG
YGFHSSYMGN ILVQLPSNGS AFYLWDTDNL TYEYLKPPIG TSRWLNWRFT NNEEWLCQSA
PIGLAYDVYA YQLGSGGQPV RLTDNSNDMG GSLGYGSFCA GNDSDYLAYS TSDQNDTTSS
LHLYDLYNQE SRLIAETTVG SGISSRAQYA DGVLAWQESN SGANNLKIMS MDTGGSYSIP
NATLQKVRFG KVSYTTSEGL FVWLKSSQES RKIWPSSTTH YLSQGTSYLV SGSLIYQIDD