Gene Ping_1327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1327 
Symbol 
ID4626440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1645308 
End bp1645817 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content36% 
IMG OID639796541 
Productco-chaperone Hsc20 
Protein accessionYP_942751 
Protein GI119945071 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID[TIGR00714] Fe-S protein assembly co-chaperone HscB 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATTACT TCGATCTATT TTCTCTTCCG GTTATATTTC CAATTGATCA AACTCGATTA 
TCCGAAACTT ACCGCGAACT GCAAAAGCAA TACCATCCGG ATAAATTTGT GATGCAAAAC
GACAGTGAAC GTTTGCGCGC AATGCAGAAA AGCACCGAAA TAAATGATGC TTATCAGACA
TTAAAAAACA GTTGTTTACG TGCACAATAT TTGCTTTTAT TGGCCGGCCT GGATATCGCT
TTAGAACATA AAACATTACA AGATACTGCT TTCTTGGTGC AGCAGATGGA ATGGCGTGAA
ACTATCGCAG CATTTACAGA AGATGATCAA GATAAAATGG ATGAATTTGC ACTGCAATTA
CAGCAGCAGG TCGCAGGTTT AGAGTCAAAG ATAGAAGTGC AACTTCAAAA TGATGAATTG
GAAGCAACTG CGGACAGCAT CAGACAATTA AAATTTATGC TCAAACTTCA AATTGAATTA
GTATTAATCG AAGAAAAATT ATTTGATTAA
 
Protein sequence
MNYFDLFSLP VIFPIDQTRL SETYRELQKQ YHPDKFVMQN DSERLRAMQK STEINDAYQT 
LKNSCLRAQY LLLLAGLDIA LEHKTLQDTA FLVQQMEWRE TIAAFTEDDQ DKMDEFALQL
QQQVAGLESK IEVQLQNDEL EATADSIRQL KFMLKLQIEL VLIEEKLFD