Gene Ping_1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1325 
Symbol 
ID4626438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1644428 
End bp1644814 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content40% 
IMG OID639796539 
Productscaffold protein 
Protein accessionYP_942749 
Protein GI119945069 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01999] FeS cluster assembly scaffold IscU 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.149472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTACA GCGAAAAAGT AATAGATCAT TATGAAAACC CACGTAACGT TGGTTCATTT 
GACAAAGATG ATCTAAGTGT TGCAACTGGT ATGGTGGGTG CACCTGCTTG TGGTGATGTA
ATGAAACTGC AACTTAAAAT TGGTGAGAAC GGTCTGATTG AAGATGCAAA ATTCAAAACA
TACGGTTGCG GTAGCGCAAT AGCATCAAGC TCTTTAGTGA CTGAATGGGT AAAAGGTAAA
ACGCTAGAAC AAGCGGGTAC TATTTCTAAC ACTCAAATCT CAGCAGAGCT TGCTTTACCG
CCAGTAAAAA TTCACTGTTC TATTCTTGCG GAAGATGCGA TTAAAGCGGC AATTACTGAT
TATAAAAGTA AACACCCGAA CGCATAA
 
Protein sequence
MAYSEKVIDH YENPRNVGSF DKDDLSVATG MVGAPACGDV MKLQLKIGEN GLIEDAKFKT 
YGCGSAIASS SLVTEWVKGK TLEQAGTISN TQISAELALP PVKIHCSILA EDAIKAAITD
YKSKHPNA