Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1325 |
Symbol | |
ID | 4626438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1644428 |
End bp | 1644814 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639796539 |
Product | scaffold protein |
Protein accession | YP_942749 |
Protein GI | 119945069 |
COG category | [C] Energy production and conversion |
COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
TIGRFAM ID | [TIGR01999] FeS cluster assembly scaffold IscU |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.149472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTACA GCGAAAAAGT AATAGATCAT TATGAAAACC CACGTAACGT TGGTTCATTT GACAAAGATG ATCTAAGTGT TGCAACTGGT ATGGTGGGTG CACCTGCTTG TGGTGATGTA ATGAAACTGC AACTTAAAAT TGGTGAGAAC GGTCTGATTG AAGATGCAAA ATTCAAAACA TACGGTTGCG GTAGCGCAAT AGCATCAAGC TCTTTAGTGA CTGAATGGGT AAAAGGTAAA ACGCTAGAAC AAGCGGGTAC TATTTCTAAC ACTCAAATCT CAGCAGAGCT TGCTTTACCG CCAGTAAAAA TTCACTGTTC TATTCTTGCG GAAGATGCGA TTAAAGCGGC AATTACTGAT TATAAAAGTA AACACCCGAA CGCATAA
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Protein sequence | MAYSEKVIDH YENPRNVGSF DKDDLSVATG MVGAPACGDV MKLQLKIGEN GLIEDAKFKT YGCGSAIASS SLVTEWVKGK TLEQAGTISN TQISAELALP PVKIHCSILA EDAIKAAITD YKSKHPNA
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