Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1306 |
Symbol | |
ID | 4625838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 1620691 |
End bp | 1622289 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639796521 |
Product | diguanylate cyclase |
Protein accession | YP_942731 |
Protein GI | 119945051 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGAAG AAACGAAAAT CAATAATGAA AATCCTGACT GGTCCGCCAA TCAAGCTTTA TTGAATAACA CTGGGATTCC AGCTTCTTCG ACACGGATTC ATTGGTTTAG TCACCTGGTC GAATCTCCCT TCCTGTTTCC GGCGATTGCC GTTCTCATGC TGGCCGCAAT CTGGAAGACA ATCCTGAACC TTATCAACAT CGAACAAACC GCGGCAGAGC AAACCGCGAC GGCATTAAGC CATGAACTGG CCGACACTTA TGAATCGCAG GTCGTGCGCT CACTGCGCGA AATCGACCAG ACTCTGAAGG TCGTCAAATA TGCGAATAAT ATCCTGAGCA TACAGGACGT ACTGCCAACG TTGAAAGCCA GAAATCTATT ACCGCCTACG CTGGTGTTCG ACATCAGTAT TGTGGACAGC AGGGGTGACA TTGTGACCAG TACGAATCTC TCGGACAATG CCAATGTTGC CGACCTTTCT TTCTTCCAGA GCCAGCTCCA GAGGGATGCT ATCTCTGTTG GTAGTCCGGA ACTTGACCCG AGCACCGGAA AGTGGAACCT GACATTTAGC CGCAGACTTG ATTTTGTCAA TGGAAAGTTT GCCGGTATTG TAATGGTCTC GGTCGACGCG GCCTATTTTG TTAGCAGCTA TGAATACTCG AAACTGGGAG AGCATGGCAT GCTTGGCATT ATCTGCGAGG ACGGCATATT CCTTGTCAGG CGCAGTGGGG AAACAATTAC TGCCAGCGAT AAGTCTAATT TAAAAGCGCT GAAAACATAT TCTGCGGTGG AAATGAAAAG CGAAACCATG CTTCAGACCA ACGTCTGGGA TGGCGTGCAG CGCTACACCA GTGCACACAA GCTCTATGGT TTCCCCCTGA CGGTGATTGT TGGATTATCC GCAGACGAAA AATTGGCCGC TGCTCAACAG AAGAAGCAAG TCTATCTGTG GCAGGCGGTA GCCAGCAGCT TTGTCATCTT CCTGATTATC GCGGTGATGT GGCGCATGAG CTATCAGCTT ACCTTAAGCC GCCAGCGCAT CATAGAGGAA CATATCACCC ATGCCGCAAG AGTCGAATAC CTTGCCTATC ATGACAGTCT CACGACGCTA CCGAACCGCA GTCTGTTCAG TAAACTGCTG AGTCATAGTA TCAAACAGGC AGATCGCCAC AATGGACTGC TGGCATTGCT ATTTCTCGAC TTGGACCATT TTAAAAATAT TAACGACACC CTTGGACACC AGGCTGGCGA CCAATTGCTG CAGGAAATCG CAGCAAGGCT CAAGAAATGT CTGCGCGAAA GTGACACTAT TGCCCGGCTA GGGGGTGACG AATTTGTTAT CATGCTGCCT GAACTGGATA ACGAAAAATA TACAGTAACA GTGGCCAAAA AAATTATTTC CGCTGTCGCC AGACCATTTA CTCTGGCCGG TCAGGAGTGC CGCATCACAG CAAGTATCGG GATCAGTACC TATCCAAAAA ACGGTCTGAA CGAACAGATT CTGACCAAAA ACGCGGATGT CGCGATGTAC AAGGCGAAGG AGAAAGGCAA GAACAACTTC CAGTTCTATT CTAATAAACT GAACGACAAT CCACTCTAA
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Protein sequence | MVEETKINNE NPDWSANQAL LNNTGIPASS TRIHWFSHLV ESPFLFPAIA VLMLAAIWKT ILNLINIEQT AAEQTATALS HELADTYESQ VVRSLREIDQ TLKVVKYANN ILSIQDVLPT LKARNLLPPT LVFDISIVDS RGDIVTSTNL SDNANVADLS FFQSQLQRDA ISVGSPELDP STGKWNLTFS RRLDFVNGKF AGIVMVSVDA AYFVSSYEYS KLGEHGMLGI ICEDGIFLVR RSGETITASD KSNLKALKTY SAVEMKSETM LQTNVWDGVQ RYTSAHKLYG FPLTVIVGLS ADEKLAAAQQ KKQVYLWQAV ASSFVIFLII AVMWRMSYQL TLSRQRIIEE HITHAARVEY LAYHDSLTTL PNRSLFSKLL SHSIKQADRH NGLLALLFLD LDHFKNINDT LGHQAGDQLL QEIAARLKKC LRESDTIARL GGDEFVIMLP ELDNEKYTVT VAKKIISAVA RPFTLAGQEC RITASIGIST YPKNGLNEQI LTKNADVAMY KAKEKGKNNF QFYSNKLNDN PL
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