| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1300 |
|---|
| Symbol | |
|---|
| ID | 4625318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 1607578 |
|---|
| End bp | 1608543 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639796510 |
|---|
| Product | ABC sugar transporter inner membrane translocator |
|---|
| Protein accession | YP_942726 |
|---|
| Protein GI | 119945046 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATGAAA ATCTGATTTT AATCTTAGAT GCCACCTTAA GAGTCTCTAC TCCTCTGATA
TTAGCGGCAC TGGCAGGGCT TTTTTCTGAA CGCTCCGGCA TTGTTAATAT TGCCTTAGAA
GGTAAAATAT TGTTTGCAGC CTTTGCTGCC GCTGCCGCAG CCTCCGTAAC AGGATCTGTT
TGGCTGGGAT TGCTCAGTGC AATAGCTGTT GCTTGTAGTT TGTCTATGCT GCACGGATTT
GCATCTATTA CCCACAAAGG TGATCAAATT GTTTCGGGGG TCGCTATTAA TATGCTGGCA
GTCGGCTTGA CGGTTACCTT GGGTCGTTAT TGGTTTGGTC TTGGCGGGCA GACACCTGCA
TTGCTTGATT CGCAACGTTT TCTGCCGATC ACGCTTCCAG GTGCTGACGC ACTGGCCGAT
GTGCCTGTAT TGGGTTTGTT ATACAGTGAA TTGATATCTG GTCATAATAT TATTGTCTAC
ATGGCATTAT TGTCAGTACC CATATGCTGG TGGGTGATCT TTAAAACCCG ATTTGGACTG
CGCCTTAGAG CGGCAGGGGA AAATCCTCAT GCGGTAGATA CAGCCGGTAT ATCAGTTGCC
TGGATTCGTT ATCGCGCCTT GCTGGTGGCA GGTCTGTTAA CCGGGATTGC AGGGGCTTAT
TTATCAACGG CACACAGTGC GGGTTTTGTG CCTAACATGA GCGCAGGTAA AGGCTTTATA
GCACTAGCGG CATTGATTTT TGGTAAATGG CGTCCGGTAC CCGTGTTATT TGGCTGTTTA
CTTTTTGGGT TTTTAGATGC AGTGGCTATC CGTTTACAGG GGACTGAACT ACCCATTATT
GGCGAAATAC CGGTGCAGTT AATTGAGGTG TTACCTTATA TTCTGACTGT CCTGTTATTG
GCTGGTTTTA TAGGCCGAGC GGTGGGCCCA AAAGCCGTTG GTATACCCTA TGTGAAGTCC
CGTTAA
|
|---|
| Protein sequence | MYENLILILD ATLRVSTPLI LAALAGLFSE RSGIVNIALE GKILFAAFAA AAAASVTGSV
WLGLLSAIAV ACSLSMLHGF ASITHKGDQI VSGVAINMLA VGLTVTLGRY WFGLGGQTPA
LLDSQRFLPI TLPGADALAD VPVLGLLYSE LISGHNIIVY MALLSVPICW WVIFKTRFGL
RLRAAGENPH AVDTAGISVA WIRYRALLVA GLLTGIAGAY LSTAHSAGFV PNMSAGKGFI
ALAALIFGKW RPVPVLFGCL LFGFLDAVAI RLQGTELPII GEIPVQLIEV LPYILTVLLL
AGFIGRAVGP KAVGIPYVKS R
|
|---|
| |