| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1297 |
|---|
| Symbol | |
|---|
| ID | 4625315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 1603701 |
|---|
| End bp | 1604705 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639796507 |
|---|
| Product | basic membrane lipoprotein |
|---|
| Protein accession | YP_942723 |
|---|
| Protein GI | 119945043 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTCTAAGCAC TACTGCGGCG GCTGTGTCGT TAGCTTTATG CTCGTTTGTT
GCAAATGCTG CAGATTTTAA ACCTGCTGTC GCCTATGACT CTGCGGGAAA ATTTGACAAA
TCTTTTAATC AGGCAGTTTT TCAGAATGGG GCAACTAAAT TTACTGAAGA TACAAAAATT
GCAGTACGTG ATTTTGTTCC ATCAAATGAT GCGCAACGGG AACAGGGCTT AGCACGTCTT
GCCCGCGGTG GTTATAATCC GATCGTTGCG GTTGGCTTTA TGTATGGTTC TGCACTGGAA
AAAATAGCTA AAAAATATCC TGATACTCAG TTTGTTATTA TCGATTCCGT TGTTGATTTA
CCGAATGTTA AGTCGCTCTT ATTTAAAGAG CATGAAGGTT CCTTTTTAGT GGGGGCATTA
GCTGCGCTGA AATCTGAAAA CCAAAAAGTA GGTTTCGTAG GCGGCATGGA TGTTCCCTTA
ATTCGTAAGT TTGCTTGCGG GTATGAGCAG GGTGCTAAGT ACATCAATAA AGAGGTTGAA
GTCTTTCAAA ATATGACTGG CTCTACCAAT GCGGCATGGT CTGACCCTGC TCGTGGTGCT
GAGCTGACCA AGAGTCAGTT TAGCCAAGGA GTTGATGTTG TTTTTGCGGC CGCAGGTGGC
ACAGGTGTAG GTGTTTATCA GGCAGCTAAG GATGGAGGCA AGTATGCGAT TGGCGTTGAT
TCAAATCAAA ACCACTTACA CCCTGGGGTA ATGCTCACAT CTATGGTTAA GCTGGTGGGT
TTGGCAACCT ATGATATTTT CAAAAAAGCG GAATCAGGTA ACTTTAGCGC GGGTATTGAC
GTCCGTGGTT TAAAAGAAAA GGGTGTCGAT TGGGCTTTAG ATGAATATAA CCGTGCACTG
GTAACGCCTG AGATGGAAGC TGAAATTAAC AGTGTTAAAG CTAAAATAGT AACAGGTGAG
ATTGTAGTAC ATGACTATAT GGCCGATAAC AGCTGCCAGT ATTAA
|
|---|
| Protein sequence | MKKILSTTAA AVSLALCSFV ANAADFKPAV AYDSAGKFDK SFNQAVFQNG ATKFTEDTKI
AVRDFVPSND AQREQGLARL ARGGYNPIVA VGFMYGSALE KIAKKYPDTQ FVIIDSVVDL
PNVKSLLFKE HEGSFLVGAL AALKSENQKV GFVGGMDVPL IRKFACGYEQ GAKYINKEVE
VFQNMTGSTN AAWSDPARGA ELTKSQFSQG VDVVFAAAGG TGVGVYQAAK DGGKYAIGVD
SNQNHLHPGV MLTSMVKLVG LATYDIFKKA ESGNFSAGID VRGLKEKGVD WALDEYNRAL
VTPEMEAEIN SVKAKIVTGE IVVHDYMADN SCQY
|
|---|
| |