| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1203 |
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| Symbol | |
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| ID | 4623754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 1501758 |
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| End bp | 1504556 |
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| Gene Length | 2799 bp |
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| Protein Length | 932 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 639796418 |
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| Product | sensor histidine kinase PAS domain-containing protein |
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| Protein accession | YP_942634 |
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| Protein GI | 119944954 |
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| COG category | [S] Function unknown
[T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG2202] FOG: PAS/PAC domain
[COG3287] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00343755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.259486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTAA TAAACTACCA GTTTAAAACA AAAAATGATT TAGAACTTTT TATAGATGAA
AATATCAAAA AGACTCATCT TTCTATTTTA ATTCAAGTTT TTAGCGGTGA TTTAAATATT
GACAATATCC TGCAAGTTTT AGATATTTTA AAGTCCAAAC TCCCACATGC AGCCATCATT
GGTTGCTCAA CGGCTGGCGA GATTGTTTCT GGCGCCATGA AAAATAATAC TCTTCAAATT
TCTTTCTCTC TTTTTGAAAA AACCAATCTC CAACTTTTTT ATTACCCTCA AACAAACTTT
GAAGATGGAG AGAAAGCTTC AAGTGAAATA GTGTCTCAAA ATACAAAAGC TGTTATCGCT
TTTAGTGAAG CATTTAAAGG TGATTCTGAA CTTTTTTTAG AAGGGTTCTC ATCTAAAAAA
CAACATATCC CTATCTCTGG CGGAAATGCC GGTGATAATC TTTTATATAA AAAAACCTTT
ATTATCTATG ACAATAAGAT TTATTTTGAG GGCATCGTCC TGTGTGCACT GAATAGCGAC
AGCTTATGTG TACACTCAAA TTATTCCTTC AGCAGTGTGT CTATTGGTAC AGAAATGATT
GTCACTAAGG CTGTGGATAA TGTGATCTAT GAGATAGATC ACACGCCGGT CAAGAAAATT
TACCAATACT ATTTGGGAGA GCATATTCTA GAAAATTTTC CAGTCAGTGT TCTCGAATTT
CCATTGGTAA AAATAGAGGA GGAAATGAGT GTTGCCAGAA TAGCCATGAG CATGACGGAA
GAGGGTGGAT TTATCTATCT AGGTCATTTT AAAAATGGCG ATAAGGTGAA ATTTGCCATA
ACAAACAATG CAGAAATATC TTCAAAATCA TATGATTTAT ATAAGAATAT TATTTGTAAT
CCAGTTGAAG CTACTTATAT TTATTCATGT TCTGCTAGGA AACAATTCCC CAAAAAATGT
TTGAATTATG AACTTCGATT GATTGAAAAA ATAGCCCCTT CAGTTGGCTT TTTCAGCTAT
GGAGAGTTTT TTCATTCAAA AATAAAAAAT CAACTTTTAA CTGTCACTAC AACGACCCTG
AGTTTGTCTG AAGCAGATAT TATACAAAGC ACAGATGAGG TGCTAGAAAG CATGCGCAGC
ACTAATATGC TGAGTTCATT GGTACACTTA GTTAATGTCT CAGATGAGAA CTTAAATCAA
TATAAAGAGC TTTTAGATAA GAGTTCTATT GTGTCAAAAG CCGATACTCG AGGGGACATC
ATTTATGTTA ATGATGAGTT TTGTACTATT TCGGGCTACT CTCGAGAAGA ATTGCTTGGC
AATAATCACA GTATCGTTAG GCATCCGGAT AACAGTAATG CCATATTTAA AAACATGTGG
ACGACTATTA CGGCTAAAAA AGTCTGGAAA GGCACGCTAA AAAATCGTGC AAAAGATGGC
TCCACCTACT ATGTAAAGAC CTTAATTATG CCTATTCTAG ATGACTCGGG ACAGATTATA
AGTTATATAG CGGCAAGAAC GGACGTAACA GAACTAATAG AAAAAGACAA AATTATTAGA
CAACAGTATA AAGATAAGTT GACCGGGTTA CAAAATAGAA ATGCACTGAT AGATAAACTA
AAAAAAATCA AGAATGAAGA TGCGACGCTT ATTCTTATTA ATATAGATAG ATTTTCTGAT
ATTAATGATT ATTACGGCTA TGAAAAAGGT GATAAAACCT TGGGACTCTT TGCATCTGTT
CTTAAAAATA AATATTCTGA ATTCTTTAAA ATAAACGGAG AAATCGTTAA AATAAGGGGC
GAAATATTTA GAATAAGCGG TGATGAGTTT GCAATACTTT GCGAACATTC ATTAGATAAA
GAAACAAAAG AGATGATAGC AGGCTTGATT ATTGATCTGG AGAATGAAGT CTATGAAATA
CTGGACGATA ATATTACCTT GCTTTTATCT TGCGGAGTGG CCAGTGGCGC GAAAAATGAA
ATATATAATC TTGCCCATAT TGCCTTAAAA GAAAATAAAA AAGATAATAA TATAGTTACT
TTTTTTAATG ATAATATGAA CTTATATAGA AAAATTGCAG ATAATATAAA AATAATAGCA
AGCATAAAAG AGGGAATACT TAACGATAAA TTTGTGCCCT TTTATCAAGG CATAGTTAAT
AATAAAACCA AAAAAATAAC TAAATATGAG TGTCTGATAC GCTTAAAAGA AGAAAATGGC
AAGGTTCTGG CGCCGTACTT TTTTCTGGAA CATGCTAAAA AAGCGAAGCT TTATTATAAG
CTTACGATGA TTATGATCAG GAAATCATTT GAAAAGTTTG CAGGCAATAA CTATGATTTT
TCTATCAACT TTACACTTCA AGATATTCAA TCCGTGACCG TTGTAAGCAT GCTGATGGAT
TATCTTGAGC AATATCAATG CGGAAACAGA TTAATTATAG AAATAGTCGA GTCTGAAGGA
ATTGAAAATT TTAATGAACT GTCAGATTTT ATAAAACAGA TTAAAAAATA CGGTTGTAAA
GTGGCAATAG ATGATTTTGG ATCAGGCTAT TCTAACTTTC ATTATTTATC AAAATTAGAT
GTGGACTATA TAAAAATAGA TGGCTCTTTA ATAAAAAATA TAGATAATGA CCCCTCTCAA
CTTGCAACCG TTGAGAGTAT TTTACTTTTT GCTAAAAAGA TGAATATAAA AACGATTGCC
GAATTTGTAG AGACAGAAAA TATTTATGAT ATTTTAAATG ATTTAGGCGT TGATTTTTCC
CAAGGGTACT ATTTTTCTAA ACCACAAGAA AGCATCTAG
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| Protein sequence | MKLINYQFKT KNDLELFIDE NIKKTHLSIL IQVFSGDLNI DNILQVLDIL KSKLPHAAII
GCSTAGEIVS GAMKNNTLQI SFSLFEKTNL QLFYYPQTNF EDGEKASSEI VSQNTKAVIA
FSEAFKGDSE LFLEGFSSKK QHIPISGGNA GDNLLYKKTF IIYDNKIYFE GIVLCALNSD
SLCVHSNYSF SSVSIGTEMI VTKAVDNVIY EIDHTPVKKI YQYYLGEHIL ENFPVSVLEF
PLVKIEEEMS VARIAMSMTE EGGFIYLGHF KNGDKVKFAI TNNAEISSKS YDLYKNIICN
PVEATYIYSC SARKQFPKKC LNYELRLIEK IAPSVGFFSY GEFFHSKIKN QLLTVTTTTL
SLSEADIIQS TDEVLESMRS TNMLSSLVHL VNVSDENLNQ YKELLDKSSI VSKADTRGDI
IYVNDEFCTI SGYSREELLG NNHSIVRHPD NSNAIFKNMW TTITAKKVWK GTLKNRAKDG
STYYVKTLIM PILDDSGQII SYIAARTDVT ELIEKDKIIR QQYKDKLTGL QNRNALIDKL
KKIKNEDATL ILINIDRFSD INDYYGYEKG DKTLGLFASV LKNKYSEFFK INGEIVKIRG
EIFRISGDEF AILCEHSLDK ETKEMIAGLI IDLENEVYEI LDDNITLLLS CGVASGAKNE
IYNLAHIALK ENKKDNNIVT FFNDNMNLYR KIADNIKIIA SIKEGILNDK FVPFYQGIVN
NKTKKITKYE CLIRLKEENG KVLAPYFFLE HAKKAKLYYK LTMIMIRKSF EKFAGNNYDF
SINFTLQDIQ SVTVVSMLMD YLEQYQCGNR LIIEIVESEG IENFNELSDF IKQIKKYGCK
VAIDDFGSGY SNFHYLSKLD VDYIKIDGSL IKNIDNDPSQ LATVESILLF AKKMNIKTIA
EFVETENIYD ILNDLGVDFS QGYYFSKPQE SI
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